mgf006107m (Mimulus guttatus)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 mgf006107m T324136_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mgf006107m Sigma 70 281 350

Links

Other Sigma 70 family TFs
Other Mimulus guttatus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.940
PK06897.1 Cannabis sativa PK06897.1 N 0.928
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.900
SIGE Vitis vinifera VIT_16s0050g02520 N 0.899
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.899
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.899
Pm019782 Prunus mume Pm019782 N 0.896
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N 0.886
Carubv10000608m.g Capsella rubella Carubv10000608m.g N 0.886
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N 0.886
MDP0000831937 Malus domestica MDP0000831937 N 0.884
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.884
Ca_03953 Cicer arietinum Ca_03953 N 0.884
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.884
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.884
Cla004302 Citrullus lanatus Cla004302 N 0.884
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.884
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N 0.871
Bra026466 Brassica rapa Bra026466 N 0.871
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N 0.871
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N 0.871
Bo9g013770 Brassica oleracea Bo9g013770 N 0.871
SIGE Arabidopsis thaliana AT5G24120 N 0.871
mgf001401m Mimulus guttatus mgf001401m N 0.870
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.870
TCM_015349 Theobroma cacao TCM_015349 N 0.870
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.870
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.870
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.870
30169.m006532 Ricinus communis 30169.m006532 N 0.870
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.855
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.855
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.855
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.855
MTR_3g090900 Medicago truncatula MTR_3g090900 N 0.841
GLYMA13G08390 Glycine max GLYMA13G08390 N 0.841
POPTR_0015s02320 Populus trichocarpa POPTR_0015s02320 N 0.829
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.826
Bo7g097160 Brassica oleracea Bo7g097160 N 0.814
Bra009735 Brassica rapa Bra009735 N 0.814
cassava29286.valid.m1 Manihot esculenta cassava29286.valid.m1 N 0.812
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.812
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.783
Si021904m.g Setaria italica Si021904m.g N 0.739
OB05G35020 Oryza brachyantha OB05G35020 N 0.739
Pavir.J13718 Panicum virgatum Pavir.J13718 N 0.739
GRMZM2G077436 Zea mays GRMZM2G077436 N 0.716
Sb09g030110 Sorghum bicolor Sb09g030110 N 0.710
OBART05G27520 Oryza barthii OBART05G27520 N 0.710
OGLUM05G29030 Oryza glumaepatula OGLUM05G29030 N 0.710
MLOC_61094 Hordeum vulgare MLOC_61094 N 0.710
LPERR05G23180 Leersia perrieri LPERR05G23180 N 0.710
BGIOSGA020460 Oryza indica BGIOSGA020460 N 0.710
F775_08366 Aegilops tauschii F775_08366 N 0.710
OLONG_028119 Oryza longistaminata OLONG_028119 N 0.710
OMERI05G23510 Oryza meridionalis OMERI05G23510 N 0.710
ORUFI05G29480 Oryza rufipogon ORUFI05G29480 N 0.710
Traes_1AL_0C41C44B1 Triticum aestivum Traes_1AL_0C41C44B1 N 0.710
ORGLA05G0239100 Oryza glaberrima ORGLA05G0239100 N 0.710
OPUNC05G25110 Oryza punctata OPUNC05G25110 N 0.710
ONIVA05G29570 Oryza nivara ONIVA05G29570 N 0.710
TRIUR3_33378 Triticum urartu TRIUR3_33378 N 0.710