mgf015154m (Mimulus guttatus)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 mgf015154m T324139_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mgf015154m Sigma 70 281 345

Links

Other Sigma 70 family TFs
Other Mimulus guttatus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g010521m.g Citrus sinensis orange1.1g010521m.g N 0.855
MDP0000939377 Malus domestica MDP0000939377 N 0.846
MDP0000934360 Malus domestica MDP0000934360 N 0.846
mgf016433m Mimulus guttatus mgf016433m N 0.831
Eucgr.A02994 Eucalyptus grandis Eucgr.A02994 N 0.831
mgf004750m Mimulus guttatus mgf004750m N 0.831
TCM_025640 Theobroma cacao TCM_025640 N 0.831
Gorai.007G247500 Gossypium raimondii Gorai.007G247500 N 0.831
Gorai.004G255000 Gossypium raimondii Gorai.004G255000 N 0.831
SapurV1A.1456s0040 Salix purpurea SapurV1A.1456s0040 N 0.815
SapurV1A.1326s0010 Salix purpurea SapurV1A.1326s0010 N 0.815
PRUPE_ppa004393mg Prunus persica PRUPE_ppa004393mg N 0.789
Pm019567 Prunus mume Pm019567 N 0.789
cassava13702.valid.m1 Manihot esculenta cassava13702.valid.m1 N 0.789
cassava13701.valid.m1 Manihot esculenta cassava13701.valid.m1 N 0.789
Traes_7BL_0D553E505 Triticum aestivum Traes_7BL_0D553E505 N 0.782
cassava41980.valid.m1 Manihot esculenta cassava41980.valid.m1 N 0.775
Cla006897 Citrullus lanatus Cla006897 N 0.775
AMTR_s00011p00266100 Amborella trichopoda AMTR_s00011p00266100 N 0.775
Cucsa.073340 Cucumis sativus Cucsa.073340 N 0.775
SIGA Vitis vinifera VIT_16s0039g00660 N 0.775
chr3.CM0127.660.nc Lotus japonicus chr3.CM0127.660.nc N 0.775
gene12547-v1.0-hybrid Fragaria vesca gene12547-v1.0-hybrid N 0.761
30148.m001468 Ricinus communis 30148.m001468 N 0.761
evm.TU.supercontig_3807.1 Carica papaya evm.TU.supercontig_3807.1 N 0.761
PK03826.1 Cannabis sativa PK03826.1 N 0.761
POPTR_0019s06020 Populus trichocarpa POPTR_0019s06020 N 0.761
Ciclev10031289m.g Citrus clementina Ciclev10031289m.g N 0.761
Ca_22622 Cicer arietinum Ca_22622 N 0.761
Ca_22625 Cicer arietinum Ca_22625 N 0.761
PDK_20s1319221g002 Phoenix dactylifera PDK_20s1319221g002 N 0.746
Thhalv10002486m.g Eutrema salsugineum Thhalv10002486m.g N 0.746
Bra008513 Brassica rapa Bra008513 N 0.746
Bo2g097550 Brassica oleracea Bo2g097550 N 0.746
Bostr.10180s0008 Boechera stricta Bostr.10180s0008 N 0.746
PGSC0003DMG400027038 Solanum tuberosum PGSC0003DMG400027038 N 0.746
Solyc06g072710.2 Solanum lycopersicum Solyc06g072710.2 N 0.746
SapurV1A.0592s0030 Salix purpurea SapurV1A.0592s0030 N 0.732
PGSC0003DMG400026491 Solanum tuberosum PGSC0003DMG400026491 N 0.732
SIGA Arabidopsis thaliana AT1G64860 N 0.732
POPTR_0013s07290 Populus trichocarpa POPTR_0013s07290 N 0.732
Solyc03g097320.2 Solanum lycopersicum Solyc03g097320.2 N 0.732
MTR_0172s0030 Medicago truncatula MTR_0172s0030 N 0.732
GLYMA09G35750 Glycine max GLYMA09G35750 N 0.732
SIGA Arabidopsis lyrata scaffold_200883.1 N 0.732
Cagra.2194s0001 Capsella grandiflora Cagra.2194s0001 N 0.732
Aquca_052_00048 Aquilegia coerulea Aquca_052_00048 N 0.732
GSMUA_Achr11G08010_001 Musa acuminata GSMUA_Achr11G08010_001 N 0.732
GLYMA12G01600 Glycine max GLYMA12G01600 N 0.732
Carubv10020145m.g Capsella rubella Carubv10020145m.g N 0.732
Lus10020365.g Linum usitatissimum Lus10020365.g N 0.729
GSMUA_Achr1G10700_001 Musa acuminata GSMUA_Achr1G10700_001 N 0.718
BRADI3G16040 Brachypodium distachyon BRADI3G16040 N 0.708