CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_001_00199
(
Aquilegia coerulea
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Aquca_001_00199
T324142_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_001_00199.11
Sigma 70
227
297
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.1
Sigma 70
322
392
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.2
Sigma 70
310
380
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.3
Sigma 70
310
380
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.4
Sigma 70
264
334
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.6
Sigma 70
227
297
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.7
Sigma 70
227
297
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.8
Sigma 70
310
380
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Aquca_001_00199.9
Sigma 70
310
380
LLRSTHSLIVYLARNYRGLGISLEDLYQAGKVGVLQGAERFDHMRGYKFSTYVQYWIRKSMSSLVENHSRV
Links
Other
Sigma 70
family TFs
Other
Aquilegia coerulea
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy