Gorai.009G415400 (Gossypium raimondii)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Gorai.009G415400 T324199_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G415400.1 Sigma 70 331 401
Gorai.009G415400.2 Sigma 70 329 399
Gorai.009G415400.3 Sigma 70 331 401

Links

Other Sigma 70 family TFs
Other Gossypium raimondii TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30078.m002307 Ricinus communis 30078.m002307 N 0.915
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N 0.761
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N 0.706
Aquca_053_00136 Aquilegia coerulea Aquca_053_00136 N 0.721
SIGF Arabidopsis thaliana AT2G36990 N 0.859
Bo4g186560 Brassica oleracea Bo4g186560 N 0.859
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.859
Bra017213 Brassica rapa Bra017213 N 0.845
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.859
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.859
cassava35219.m1 Manihot esculenta cassava35219.m1 N 0.859
Ca_12052 Cicer arietinum Ca_12052 N 0.789
Ca_17153 Cicer arietinum Ca_17153 N 0.732
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N 0.831
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.831
Cla018594 Citrullus lanatus Cla018594 N 0.873
Cucsa.124610 Cucumis sativus Cucsa.124610 N 0.845
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.859
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.859
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.859
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N 0.887
GLYMA03G33970 Glycine max GLYMA03G33970 N 0.789
GLYMA05G22730 Glycine max GLYMA05G22730 N 0.775
GLYMA10G06500 Glycine max GLYMA10G06500 N 0.775
GLYMA13G20700 Glycine max GLYMA13G20700 N 0.789
GLYMA19G36710 Glycine max GLYMA19G36710 N 0.789
Gorai.006G165200 Gossypium raimondii Gorai.006G165200 N 0.859
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N 0.704
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N 0.703
mgf007606m Mimulus guttatus mgf007606m N 0.845
MTR_1g063850 Medicago truncatula MTR_1g063850 N 0.718
MTR_7g101840 Medicago truncatula MTR_7g101840 N 0.831
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.863
PDK_20s1626471g002 Phoenix dactylifera PDK_20s1626471g002 N 0.718
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.873
Pm030137 Prunus mume Pm030137 N 0.887
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.859
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.887
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N 0.901
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.873
TCM_022198 Theobroma cacao TCM_022198 N 0.944
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.859
SIGF Vitis vinifera VIT_08s0040g01560 N 0.845