MDP0000235160 (Malus domestica)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 MDP0000235160 T324213_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000235160 Sigma 70 150 220

Links

Other Sigma 70 family TFs
Other Malus domestica TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa017025mg Prunus persica PRUPE_ppa017025mg N 0.901
Pm016510 Prunus mume Pm016510 N 0.901
MDP0000266956 Malus domestica MDP0000266956 N 0.873
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.859
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.803
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.732
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.732
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.718
PK06863.1 Cannabis sativa PK06863.1 N 0.718
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.718
mgf003626m Mimulus guttatus mgf003626m N 0.718
SIG4 Populus trichocarpa POPTR_0009s06210 N 0.718
PGSC0003DMG402006783 Solanum tuberosum PGSC0003DMG402006783 N 0.718
Solyc01g087690.1 Solanum lycopersicum Solyc01g087690.1 N 0.718
Bra023430 Brassica rapa Bra023430 N 0.704
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.704
Bo9g166510 Brassica oleracea Bo9g166510 N 0.704
Bo2g011520 Brassica oleracea Bo2g011520 N 0.704
Bra008807 Brassica rapa Bra008807 N 0.704