TF Information

orange1.1g008352m.g *(Citrus sinensis)* Sigma 70
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF04542 (Sigma70_r2)	IPR007627	orange1.1g008352m.g	T324222_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
orange1.1g008352m	Sigma 70	333	403	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g008556m	Sigma 70	325	395	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g008652m	Sigma 70	322	392	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g009567m	Sigma 70	296	366	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g011324m	Sigma 70	333	403	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g011577m	Sigma 70	333	403	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g011992m	Sigma 70	333	383	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFAN
orange1.1g014193m	Sigma 70	333	403	LINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g014241m	Sigma 70	333	402	LINANLRLVVHVAKQYQGRGISLHDLLQGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT
orange1.1g017044m	Sigma 70	333	362	LINANLRLVVHVAKQYQGRGISLHDLLQVN
orange1.1g018065m	Sigma 70	333	361	LINANLRLVVHVAKQYQGRGISLHDLLQI

Links
Other Sigma 70 family TFs
Other *Citrus sinensis* TFs

Invalid Input OrderBy

44 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action