orange1.1g009449m.g (Citrus sinensis)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 orange1.1g009449m.g T324223_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g009449m Sigma 70 300 370
orange1.1g012638m Sigma 70 300 370
orange1.1g013472m Sigma 70 300 370
orange1.1g016759m Sigma 70 300 370
orange1.1g016880m Sigma 70 300 370
orange1.1g016894m Sigma 70 300 370
orange1.1g017616m Sigma 70 300 368

Links

Other Sigma 70 family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action