PK06863.1 (Cannabis sativa)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 PK06863.1 T324271_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK06863.1 Sigma 70 103 173

Links

Other Sigma 70 family TFs
Other Cannabis sativa TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.789
PDK_20s1385451g001 Phoenix dactylifera PDK_20s1385451g001 N 0.789
SIGD Arabidopsis thaliana AT5G13730 N 0.775
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.775
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.775
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.775
Bo2g011520 Brassica oleracea Bo2g011520 N 0.775
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.775
Bo9g166510 Brassica oleracea Bo9g166510 N 0.775
Bra008807 Brassica rapa Bra008807 N 0.775
Bra023430 Brassica rapa Bra023430 N 0.775
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.775
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.761
mgf003626m Mimulus guttatus mgf003626m N 0.761
Pm016510 Prunus mume Pm016510 N 0.761
GSMUA_Achr4G18530_001 Musa acuminata GSMUA_Achr4G18530_001 N 0.761
PRUPE_ppa017025mg Prunus persica PRUPE_ppa017025mg N 0.761
LjSGA_045184.1 Lotus japonicus LjSGA_045184.1 N 0.746
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.746
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.746
SapurV1A.4644s0020 Salix purpurea SapurV1A.4644s0020 N 0.732
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.732
SapurV1A.0027s0740 Salix purpurea SapurV1A.0027s0740 N 0.732
SIG4 Populus trichocarpa POPTR_0009s06210 N 0.718
AMTR_s00025p00248060 Amborella trichopoda AMTR_s00025p00248060 N 0.718
MDP0000235160 Malus domestica MDP0000235160 N 0.718
cassava43094.valid.m1 Manihot esculenta cassava43094.valid.m1 N 0.718
MTR_3g033420 Medicago truncatula MTR_3g033420 N 0.704