CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN31444
(
Caenorhabditis brenneri
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
CBN31444
T324416_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.970
0.970
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.703
0.703
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.703
0.703
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN31444
SMAD
162
262
VRKAIESLVKKLKDKRIELDSLITAITSNGKQPTGCVTIQRSLDGRLQVAGRKGVPHVVYARIWRWPKVSKNELVKLVQCQTSADHPDNICINPYHYERVV
Links
Other
SMAD
family TFs
Other
Caenorhabditis brenneri
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy