CGI_10000594 (Crassostrea gigas)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 CGI_10000594 T324417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT

ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.839 0.839
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY

RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.839 0.839
Smad4
M05889_2.00
Mus musculus
KCYAGACR

YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
0.821 0.821
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN

NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
0.821 0.821
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN

NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
0.821 0.821
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS

SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
0.821 0.821
SMAD4
M11275_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
0.821 0.821
SMAD4
M11276_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
0.821 0.821
SMAD4
M11277_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
0.821 0.821
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC17551 SMAD 72 127

Links

Other SMAD family TFs
Other Crassostrea gigas TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL013896 Aedes aegypti AAEL013896 I 0.839
AAH84196 Xenopus laevis AAH84196 I 0.821
AALB009485 Anopheles albimanus AALB009485 I 0.821
Aan_R014474 Calypte anna Aan_R014474 I 0.750
AARA004719 Anopheles arabiensis AARA004719 I 0.821
AATE010695 Anopheles atroparvus AATE010695 I 0.821
ACHR000067 Anopheles christyi ACHR000067 I 0.821
ACOM037505 Anopheles coluzzii ACOM037505 I 0.821
ACUA025512 Anopheles culicifacies ACUA025512 I 0.821
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.804
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.768
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.750
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I 0.750
ADAC007516 Anopheles darlingi ADAC007516 I 0.821
ADIR002761 Anopheles dirus ADIR002761 I 0.821
AEPI002385 Anopheles epiroticus AEPI002385 I 0.821
AFAF011208 Anopheles farauti AFAF011208 I 0.821
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.821
AFUN009864 Anopheles funestus AFUN009864 I 0.821
AGAP002902 Anopheles gambiae AGAP002902 I 0.821
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I 0.786
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.821
AMAM019778 Anopheles maculatus AMAM019778 I 0.821
AMEM015931 Anopheles merus AMEM015931 I 0.821
AMIN000723 Anopheles minimus AMIN000723 I 0.821
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.732
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.732
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.821
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.821
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.821
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.839
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.821
CapteG179368 Capitella teleta CapteG179368 I 0.821
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.821
CLEC002594 Cimex lectularius CLEC002594 I 0.821
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.821
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.821
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.821
D917_09719 Trichinella nativa D917_09719 I 0.714
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.821
ECPE_0001832001 Echinostoma caproni ECPE_0001832001 I 0.714
EFV62078 Trichinella spiralis EFV62078 I 0.714
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.821
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.821
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I 0.804
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I 0.804
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.821
SMAD4 Bos taurus ENSBTAG00000006919 I 0.821
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.821
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.821
smad4 Ciona intestinalis ENSCING00000005559 I 0.786
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.821
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.821
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.821
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.786
SMAD4 Danio rerio ENSDARG00000012649 I 0.804
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I 0.804
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.821
Smad4 Dipodomys ordii ENSDORG00000009089 I 0.821
SMAD4 Equus caballus ENSECAG00000017857 I 0.821
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.821
SMAD4 Felis catus ENSFCAG00000005257 I 0.821
SMAD4 Homo sapiens ENSG00000141646 D 0.821
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I 0.804
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.821
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.821
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.786
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.821
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I 0.821
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.821
ENSLOCG00000006749 Lepisosteus oculatus ENSLOCG00000006749 N 0.821
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.821
SMAD4 Microcebus murinus ENSMICG00000017525 I 0.804
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.821
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.821
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.821
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.821
Smad4 Mus musculus ENSMUSG00000024515 D 0.821
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.821
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.821
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.821
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.821
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.821
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.821
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.786
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.786
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.821
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.821
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.821
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.821
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.821
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.821
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.821
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.821
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.750
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.804
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.786
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.821
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.821
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.821
SMAD4 Pteropus vampyrus ENSPVAG00000004261 I 0.804
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.821
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.821
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.821
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.821
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.821
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.714
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.821
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I 0.804
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.821
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.821
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.821
ENSXMAG00000000346 Xiphophorus maculatus ENSXMAG00000000346 N 0.750
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.821
Med Drosophila melanogaster FBgn0011655 D 0.839
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.839
GF22974 Drosophila ananassae FBgn0099968 I 0.839
GG11819 Drosophila erecta FBgn0104114 I 0.839
GH18642 Drosophila grimshawi FBgn0126109 I 0.839
GI23400 Drosophila mojavensis FBgn0146126 I 0.839
GL23637 Drosophila persimilis FBgn0161227 I 0.839
GM16436 Drosophila sechellia FBgn0171351 I 0.839
GJ23092 Drosophila virilis FBgn0210194 I 0.839
GK11724 Drosophila willistoni FBgn0213735 I 0.839
GE10952 Drosophila yakuba FBgn0228782 I 0.839
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.821
GB50071 Apis mellifera GB50071 I 0.821
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.821
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.821
HelroG88197 Helobdella robusta HelroG88197 I 0.786
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.821
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.821
HMEL002203 Heliconius melpomene HMEL002203 I 0.821
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.821
ISCW018468 Ixodes scapularis ISCW018468 I 0.839
KGM_12572 Danaus plexippus KGM_12572 I 0.821
L798_13939 Zootermopsis nevadensis L798_13939 I 0.839
LCUP007928 Lucilia cuprina LCUP007928 I 0.839
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.821
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.839
MCINX014520 Melitaea cinxia MCINX014520 I 0.821
MDOA012885 Musca domestica MDOA012885 I 0.839
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.821
NEMVEDRAFT_v1g18576 Nematostella vectensis NEMVEDRAFT_v1g18576 I 0.732
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.768
NV12984 Nasonia vitripennis NV12984 I 0.821
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.857
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.821
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.821
PHUM002670 Pediculus humanus PHUM002670 I 0.839
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.839
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.821
RPRC010188 Rhodnius prolixus RPRC010188 I 0.821
Sakowv30001112m.g Saccoglossus kowalevskii Sakowv30001112m.g I 0.701
SINV15516 Solenopsis invicta SINV15516 I 0.821
SMAR013850 Strigamia maritima SMAR013850 I 0.839
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.732
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.839
SPU_017971 Strongylocentrotus purpuratus SPU_017971 I 0.821
T265_11013 Opisthorchis viverrini T265_11013 I 0.732
TC010848 Tribolium castaneum TC010848 I 0.821
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.804
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.821
smad4.2.S Xenopus laevis XB-GENE-5995204 I 0.804
smad4.2.L Xenopus laevis XB-GENE-6256010 I 0.804
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.821
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.750
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.821
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.768