CGI_10017370 (Crassostrea gigas)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 CGI_10017370 T324419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.822 0.822
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.822 0.822
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.822 0.822
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.822 0.822
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.822 0.822
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.822 0.822
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.822 0.822
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.822 0.822
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC26591 SMAD 30 130

Links

Other SMAD family TFs
Other Crassostrea gigas TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22036741m.g Octopus bimaculoides Ocbimv22036741m.g I 0.887
Gfo_R000026 Geospiza fortis Gfo_R000026 I 0.880
SMAR008230 Strigamia maritima SMAR008230 I 0.861
L798_14024 Zootermopsis nevadensis L798_14024 I 0.851
smad3a Danio rerio ENSDARG00000036096 I 0.851
SMAD3 Echinops telfairi ENSETEG00000003356 I 0.842
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I 0.842
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.832
smad3a Oryzias latipes ENSORLG00000002207 I 0.832
LotgiG189014 Lottia gigantea LotgiG189014 I 0.832
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.832
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.832
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.832
Sakowv30032201m.g Saccoglossus kowalevskii Sakowv30032201m.g I 0.828
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I 0.825
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I 0.825
Brh_R001115 Buceros rhinoceros Brh_R001115 I 0.825
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I 0.825
ENSLACG00000010552 Latimeria chalumnae ENSLACG00000010552 I 0.825
Tal_R001210 Tyto alba Tal_R001210 I 0.825
ENSMEUG00000016668 Macropus eugenii ENSMEUG00000016668 I 0.823
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.822
Smad3 Mus musculus ENSMUSG00000032402 D 0.822
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.822
SMAD3 Ochotona princeps ENSOPRG00000014996 I 0.822
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I 0.822
SMAD3 Otolemur garnettii ENSOGAG00000014217 I 0.822
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I 0.822
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.822
Smad3 Rattus norvegicus ENSRNOG00000008620 I 0.822
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.822
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I 0.822
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I 0.822
SMAD3 Pan troglodytes ENSPTRG00000007199 I 0.822
Aan_R005610 Calypte anna Aan_R005610 I 0.822
SMAD3 Microcebus murinus ENSMICG00000006119 I 0.822
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I 0.822
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.822
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.822
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I 0.822
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.822
SMAD3 Canis familiaris ENSCAFG00000017388 I 0.822
SMAD3 Homo sapiens ENSG00000166949 D 0.822
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.822
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I 0.822
SMAD3 Callithrix jacchus ENSCJAG00000002088 I 0.822
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.822
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.822
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I 0.822
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.822
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.822
CapteG167863 Capitella teleta CapteG167863 I 0.822
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I 0.822
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.822
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I 0.816
ACEP23524 Atta cephalotes ACEP23524 I 0.816
Brh_R001114 Buceros rhinoceros Brh_R001114 I 0.816
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I 0.816
smad3.L Xenopus laevis XB-GENE-864816 I 0.812
smad3b Danio rerio ENSDARG00000010207 I 0.812
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I 0.812
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.812
smad3 Xenopus tropicalis XB-GENE-481992 I 0.812
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.812
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.812
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I 0.812
SMAD3 Equus caballus ENSECAG00000020259 I 0.810
ML011743a Mnemiopsis leidyi ML011743a I 0.810
ISCW001846 Ixodes scapularis ISCW001846 I 0.802
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I 0.802
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I 0.802
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.802
Gfo_R012055 Geospiza fortis Gfo_R012055 I 0.802
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I 0.802
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.802
ENSP00000332973 Macaca fascicularis ENSP00000332973 I 0.800
ENSOARG00000018267 Ovis aries ENSOARG00000018267 I 0.795
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.794
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I 0.792
Aan_R002236 Calypte anna Aan_R002236 I 0.792
AAB39329 Xenopus laevis AAB39329 I 0.792
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I 0.792
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I 0.792
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I 0.792
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.792
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.792
SMAD2 Sorex araneus ENSSARG00000003487 I 0.792
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 0.792
Tal_R011237 Tyto alba Tal_R011237 I 0.789
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I 0.789
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.782
smad2.S Xenopus laevis XB-GENE-864923 I 0.782
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I 0.782
smad3b Oryzias latipes ENSORLG00000006803 I 0.782
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.782
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I 0.778
XP_002157279.1 Hydra magnipapillata XP_002157279.1 I 0.775
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I 0.772
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.772
Tal_R000062 Tyto alba Tal_R000062 I 0.771
SMAD3 Taeniopygia guttata ENSTGUG00000009470 I 0.758
SMAD3 Felis catus ENSFCAG00000027081 I 0.757
SINV22770 Solenopsis invicta SINV22770 I 0.756
HelroG185435 Helobdella robusta HelroG185435 I 0.752
ENSTRUG00000002512 Takifugu rubripes ENSTRUG00000002512 I 0.746
PPAI005080 Phlebotomus papatasi PPAI005080 I 0.744
TriadG49742 Trichoplax adhaerens TriadG49742 I 0.743
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I 0.743
TMUE_s0005013500 Trichuris muris TMUE_s0005013500 I 0.743
Pvit_04529 Pogona vitticeps Pvit_04529 I 0.740
ENSETEG00000017446 Echinops telfairi ENSETEG00000017446 I 0.734
NV10880 Nasonia vitripennis NV10880 I 0.733
ENSCING00000006188 Ciona intestinalis ENSCING00000006188 I 0.733
PHUM033930 Pediculus humanus PHUM033930 I 0.730
ENSOARG00000018276 Ovis aries ENSOARG00000018276 I 0.727
Cmyd_10013581 Chelonia mydas Cmyd_10013581 I 0.726
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I 0.723
EFV60166 Trichinella spiralis EFV60166 I 0.723
D918_09504 Trichuris suis D918_09504 I 0.723
D917_04509 Trichinella nativa D917_04509 I 0.723
SMAD2 Microcebus murinus ENSMICG00000007882 I 0.721
Smad5 Dipodomys ordii ENSDORG00000004533 I 0.721
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I 0.718
CpipJ_CPIJ018354 Culex pipiens CpipJ_CPIJ018354 I 0.718
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I 0.713
ENSSHAG00000012543 Sarcophilus harrisii ENSSHAG00000012543 I 0.712
Aqu1.222022 Amphimedon queenslandica Aqu1.222022 I 0.707
Alligator_sinensis_CCG004626.1 Alligator sinensis Alligator_sinensis_CCG004626.1 I 0.707