EFV60166 (Trichinella spiralis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 EFV60166 T324450_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.733 0.733
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.733 0.733
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.733 0.733
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.733 0.733
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.733 0.733
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.733 0.733
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.733 0.733
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV60166 SMAD 44 144

Links

Other SMAD family TFs
Other Trichinella spiralis TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_04509 Trichinella nativa D917_04509 I 1.000
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I 0.871
TMUE_s0005013500 Trichuris muris TMUE_s0005013500 I 0.871
D918_09504 Trichuris suis D918_09504 I 0.871
Brh_R001114 Buceros rhinoceros Brh_R001114 I 0.763
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I 0.763
ISCW001846 Ixodes scapularis ISCW001846 I 0.762
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.762
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.762
Gfo_R012055 Geospiza fortis Gfo_R012055 I 0.762
Gfo_R000026 Geospiza fortis Gfo_R000026 I 0.760
smad3b Oryzias latipes ENSORLG00000006803 I 0.752
smad3a Oryzias latipes ENSORLG00000002207 I 0.752
Aan_R002236 Calypte anna Aan_R002236 I 0.752
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I 0.752
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.752
SMAR008230 Strigamia maritima SMAR008230 I 0.752
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I 0.752
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I 0.752
SMAD2 Sorex araneus ENSSARG00000003487 I 0.752
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I 0.752
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.752
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.752
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I 0.752
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.752
L798_14024 Zootermopsis nevadensis L798_14024 I 0.752
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.752
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.752
smad2.S Xenopus laevis XB-GENE-864923 I 0.752
AAB39329 Xenopus laevis AAB39329 I 0.752
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 0.752
smad3 Xenopus tropicalis XB-GENE-481992 I 0.752
CapteG167863 Capitella teleta CapteG167863 I 0.752
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.750
ENSOARG00000018267 Ovis aries ENSOARG00000018267 I 0.744
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I 0.743
smad3a Danio rerio ENSDARG00000036096 I 0.743
smad3b Danio rerio ENSDARG00000010207 I 0.743
smad3.L Xenopus laevis XB-GENE-864816 I 0.743
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I 0.743
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.743
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.743
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I 0.743
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.743
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.743
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I 0.743
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.743
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.743
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.743
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I 0.743
Aan_R005610 Calypte anna Aan_R005610 I 0.743
ACEP23524 Atta cephalotes ACEP23524 I 0.737
Tal_R011237 Tyto alba Tal_R011237 I 0.737
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I 0.737
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I 0.735
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I 0.733
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I 0.733
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I 0.733
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.733
SMAD3 Pan troglodytes ENSPTRG00000007199 I 0.733
Smad3 Rattus norvegicus ENSRNOG00000008620 I 0.733
SMAD3 Homo sapiens ENSG00000166949 D 0.733
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.733
SMAD3 Microcebus murinus ENSMICG00000006119 I 0.733
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.733
Smad3 Mus musculus ENSMUSG00000032402 D 0.733
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.733
SMAD3 Echinops telfairi ENSETEG00000003356 I 0.733
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I 0.733
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.733
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I 0.733
SMAD3 Canis familiaris ENSCAFG00000017388 I 0.733
SMAD3 Callithrix jacchus ENSCJAG00000002088 I 0.733
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.733
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.733
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I 0.733
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I 0.733
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I 0.733
SMAD3 Otolemur garnettii ENSOGAG00000014217 I 0.733
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I 0.733
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.733
SMAD3 Ochotona princeps ENSOPRG00000014996 I 0.733
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I 0.733
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I 0.730
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I 0.730
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I 0.730
Tal_R001210 Tyto alba Tal_R001210 I 0.730
Brh_R001115 Buceros rhinoceros Brh_R001115 I 0.730
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.723
nAv.1.0.1.g10386 Acanthocheilonema viteae nAv.1.0.1.g10386 N 0.723
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.723
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.723
ENSP00000332973 Macaca fascicularis ENSP00000332973 I 0.720
PPAI005080 Phlebotomus papatasi PPAI005080 I 0.718
ENSLACG00000010552 Latimeria chalumnae ENSLACG00000010552 I 0.714
Tal_R000062 Tyto alba Tal_R000062 I 0.714
Bm3140 Brugia malayi Bm3140 N 0.713
OFLC_0000751101 Onchocerca flexuosa OFLC_0000751101 N 0.713
nLs.2.1.2.g07765 Litomosoides sigmodontis nLs.2.1.2.g07765 N 0.713
nOo.2.0.1.g09375 Onchocerca ochengi nOo.2.0.1.g09375 N 0.713
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I 0.713
BTMF_0000153801 Brugia timori BTMF_0000153801 N 0.713
WBGene00238556 Onchocerca volvulus WBGene00238556 N 0.713
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.713
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.703
nDi.2.2.2.g03838 Dirofilaria immitis nDi.2.2.2.g03838 N 0.703
EEL_0000740001 Elaeophora elaphi EEL_0000740001 N 0.703
nRc.2.0.1.g17233 Romanomermis culicivorax nRc.2.0.1.g17233 N 0.700
PHUM033930 Pediculus humanus PHUM033930 I 0.700