EFV62078 (Trichinella spiralis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 EFV62078 T324451_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.824 0.824
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.824 0.824
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.824 0.824
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.824 0.824
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.824 0.824
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.824 0.824
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.824 0.824
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.824 0.824
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.824 0.824
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV62078 SMAD 143 244

Links

Other SMAD family TFs
Other Trichinella spiralis TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_09719 Trichinella nativa D917_09719 I 1.000
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.951
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.941
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.853
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.853
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.853
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.853
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.843
SINV15516 Solenopsis invicta SINV15516 I 0.843
NV12984 Nasonia vitripennis NV12984 I 0.843
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.843
ISCW018468 Ixodes scapularis ISCW018468 I 0.843
RPRC010188 Rhodnius prolixus RPRC010188 I 0.843
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.843
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.843
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.843
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.843
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.843
CLEC002594 Cimex lectularius CLEC002594 I 0.843
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.843
GB50071 Apis mellifera GB50071 I 0.843
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.843
CapteG179368 Capitella teleta CapteG179368 I 0.843
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.833
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.833
HelroG88197 Helobdella robusta HelroG88197 I 0.833
ASU_13433 Ascaris suum ASU_13433 I 0.833
Bm3575 Brugia malayi Bm3575 I 0.833
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.833
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I 0.833
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.833
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.833
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.833
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.833
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.833
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.833
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.833
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.833
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.833
LOAG_08923 Loa loa LOAG_08923 I 0.833
L798_13939 Zootermopsis nevadensis L798_13939 I 0.833
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.833
HMEL002203 Heliconius melpomene HMEL002203 I 0.833
SMAR013850 Strigamia maritima SMAR013850 I 0.833
KGM_12572 Danaus plexippus KGM_12572 I 0.833
MCINX014520 Melitaea cinxia MCINX014520 I 0.833
ADAC007516 Anopheles darlingi ADAC007516 I 0.833
AARA004719 Anopheles arabiensis AARA004719 I 0.833
AALB009485 Anopheles albimanus AALB009485 I 0.833
AGAP002902 Anopheles gambiae AGAP002902 I 0.833
AFUN009864 Anopheles funestus AFUN009864 I 0.833
AATE010695 Anopheles atroparvus AATE010695 I 0.833
ACHR000067 Anopheles christyi ACHR000067 I 0.833
AEPI002385 Anopheles epiroticus AEPI002385 I 0.833
ADIR002761 Anopheles dirus ADIR002761 I 0.833
ACUA025512 Anopheles culicifacies ACUA025512 I 0.833
ACOM037505 Anopheles coluzzii ACOM037505 I 0.833
AAEL013896 Aedes aegypti AAEL013896 I 0.833
AMAM019778 Anopheles maculatus AMAM019778 I 0.833
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.833
AFAF011208 Anopheles farauti AFAF011208 I 0.833
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.833
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.833
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.833
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.833
AMEM015931 Anopheles merus AMEM015931 I 0.833
PHUM002670 Pediculus humanus PHUM002670 I 0.833
AMIN000723 Anopheles minimus AMIN000723 I 0.833
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.833
TC010848 Tribolium castaneum TC010848 I 0.833
GK11724 Drosophila willistoni FBgn0213735 I 0.824
GM16436 Drosophila sechellia FBgn0171351 I 0.824
GL23637 Drosophila persimilis FBgn0161227 I 0.824
GI23400 Drosophila mojavensis FBgn0146126 I 0.824
GJ23092 Drosophila virilis FBgn0210194 I 0.824
GE10952 Drosophila yakuba FBgn0228782 I 0.824
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.824
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.824
LotgiG131078 Lottia gigantea LotgiG131078 I 0.824
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.824
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.824
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.824
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.824
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.824
AAH84196 Xenopus laevis AAH84196 I 0.824
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.824
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.824
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.824
LCUP007928 Lucilia cuprina LCUP007928 I 0.824
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.824
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.824
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.824
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.824
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.824
MDOA012885 Musca domestica MDOA012885 I 0.824
GH18642 Drosophila grimshawi FBgn0126109 I 0.824
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.824
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.824
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.824
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.824
Med Drosophila melanogaster FBgn0011655 D 0.824
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.824
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.824
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.824
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.824
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.824
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.824
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.824
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.824
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.824
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.824
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.824
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.824
GG11819 Drosophila erecta FBgn0104114 I 0.824
SMAD4 Homo sapiens ENSG00000141646 D 0.824
SMAD4 Felis catus ENSFCAG00000005257 I 0.824
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.824
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.824
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.824
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.824
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.824
SMAD4 Bos taurus ENSBTAG00000006919 I 0.824
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.824
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.824
SMAD4 Equus caballus ENSECAG00000017857 I 0.824
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.824
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.824
si:dkey-239n17.4 Danio rerio ENSDARG00000070428 I 0.824
SMAD4 Danio rerio ENSDARG00000012649 I 0.824
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.824
Smad4 Mus musculus ENSMUSG00000024515 D 0.824
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.824
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.824
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.824
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.824
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.824
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.824
GF22974 Drosophila ananassae FBgn0099968 I 0.824
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.824
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.824
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.824
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.824
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.824
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.824
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.824
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.824
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I 0.814
smad4a Oryzias latipes ENSORLG00000005020 I 0.814
gb:cr929477 Tetraodon nigroviridis ENSTNIG00000003193 I 0.814
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I 0.814
gb:cr929477 Takifugu rubripes ENSTRUG00000011769 I 0.814
ENSAMXG00000019219 Astyanax mexicanus ENSAMXG00000019219 I 0.814
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I 0.814
ENSXMAG00000015245 Xiphophorus maculatus ENSXMAG00000015245 I 0.814
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.814
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I 0.814
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.814
smad4a Danio rerio ENSDARG00000075226 I 0.814
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I 0.814
smad4a Gasterosteus aculeatus ENSGACG00000007495 I 0.814
ENSGMOG00000005844 Gadus morhua ENSGMOG00000005844 I 0.814
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.814
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.814
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.814
Smad4 Dipodomys ordii ENSDORG00000009089 I 0.814
ENSPFOG00000018987 Poecilia formosa ENSPFOG00000018987 I 0.814
smad4.2.L Xenopus laevis XB-GENE-6256010 I 0.804
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.804
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.804
ML02191a Mnemiopsis leidyi ML02191a I 0.804
smad4.2.S Xenopus laevis XB-GENE-5995204 I 0.804
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.804
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I 0.804
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.794
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I 0.794
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.794
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.784
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.784
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.784
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.775
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.775
smad4 Ciona intestinalis ENSCING00000005559 I 0.765
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.765
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.765
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.765
HelroG76435 Helobdella robusta HelroG76435 I 0.755
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.755
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.755
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.745
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I 0.745
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I 0.745
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I 0.745
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I 0.745
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I 0.745
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N 0.735
HCOI00676200 Haemonchus contortus HCOI00676200 I 0.735
BXY_0211100 Bursaphelenchus xylophilus BXY_0211100 N 0.735
ACEP19585 Atta cephalotes ACEP19585 I 0.735
GPLIN_000772200 Globodera pallida GPLIN_000772200 I 0.735
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I 0.725
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N 0.725
Minc05381 Meloidogyne incognita Minc05381 I 0.725
Minc06628 Meloidogyne incognita Minc06628 I 0.725
Minc15475 Meloidogyne incognita Minc15475 N 0.725
T265_11013 Opisthorchis viverrini T265_11013 I 0.716
D915_03789 Fasciola hepatica D915_03789 I 0.716
L889_g28104 Steinernema feltiae L889_g28104 I 0.716
CGI_10000594 Crassostrea gigas CGI_10000594 I 0.714
tetur10g00380 Tetranychus urticae tetur10g00380 I 0.709
Aqu1.229767 Amphimedon queenslandica Aqu1.229767 I 0.706
ECPE_0001832001 Echinostoma caproni ECPE_0001832001 I 0.706
L893_g15056 Steinernema glaseri L893_g15056 I 0.706
BXY_0664400 Bursaphelenchus xylophilus BXY_0664400 N 0.706
L596_g15 Steinernema carpocapsae L596_g15 I 0.706
L898_g26477 Steinernema monticolum L898_g26477 I 0.706
L889_g22387 Steinernema feltiae L889_g22387 I 0.703