ENSCING00000006188 (Ciona intestinalis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSCING00000006188 T324518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN

NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.723 0.723
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA

TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.723 0.723
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.723 0.723
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.723 0.723
Smad3
M09637_2.00
Mus musculus
BYAGMCWN

NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.723 0.723
SMAD3
M11283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.723 0.723
SMAD3
M11284_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.723 0.723
SMAD3
M11285_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000012794 SMAD 28 128

Links

Other SMAD family TFs
Other Ciona intestinalis TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I 0.980
Tal_R001210 Tyto alba Tal_R001210 I 0.810
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I 0.810
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I 0.810
Brh_R001115 Buceros rhinoceros Brh_R001115 I 0.810
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I 0.782
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I 0.762
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.762
smad3b Danio rerio ENSDARG00000010207 I 0.762
smad3a Oryzias latipes ENSORLG00000002207 I 0.762
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.762
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I 0.762
smad3 Xenopus tropicalis XB-GENE-481992 I 0.762
smad3.L Xenopus laevis XB-GENE-864816 I 0.762
XP_002157279.1 Hydra magnipapillata XP_002157279.1 I 0.752
SMAR008230 Strigamia maritima SMAR008230 I 0.752
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.752
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.752
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.752
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.752
ML011743a Mnemiopsis leidyi ML011743a I 0.750
Aan_R002236 Calypte anna Aan_R002236 I 0.743
Aan_R005610 Calypte anna Aan_R005610 I 0.743
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.743
SMAD2 Sorex araneus ENSSARG00000003487 I 0.743
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I 0.743
HelroG185435 Helobdella robusta HelroG185435 I 0.743
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I 0.743
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I 0.743
AAB39329 Xenopus laevis AAB39329 I 0.743
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 0.743
Gfo_R012055 Geospiza fortis Gfo_R012055 I 0.743
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.743
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.743
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I 0.743
smad2.S Xenopus laevis XB-GENE-864923 I 0.743
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.743
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.733
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.733
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.733
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.733
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.733
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.733
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I 0.733
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.733
NEMVEDRAFT_v1g228395 Nematostella vectensis NEMVEDRAFT_v1g228395 I 0.723
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I 0.723
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I 0.723
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.723
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I 0.723
LotgiG189014 Lottia gigantea LotgiG189014 I 0.723
L798_14024 Zootermopsis nevadensis L798_14024 I 0.723
SMAD3 Pan troglodytes ENSPTRG00000007199 I 0.723
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.723
SMAD3 Homo sapiens ENSG00000166949 D 0.723
SMAD3 Microcebus murinus ENSMICG00000006119 I 0.723
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.723
SMAD3 Otolemur garnettii ENSOGAG00000014217 I 0.723
Smad3 Mus musculus ENSMUSG00000032402 D 0.723
SMAD3 Echinops telfairi ENSETEG00000003356 I 0.723
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I 0.723
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.723
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.723
SMAD3 Canis familiaris ENSCAFG00000017388 I 0.723
SMAD3 Callithrix jacchus ENSCJAG00000002088 I 0.723
smad3a Danio rerio ENSDARG00000036096 I 0.723
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.723
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.723
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I 0.723
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I 0.723
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I 0.723
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I 0.723
Smad3 Rattus norvegicus ENSRNOG00000008620 I 0.723
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I 0.723
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.723
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I 0.723
SMAD3 Ochotona princeps ENSOPRG00000014996 I 0.723
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I 0.713
BGLB001215 Biomphalaria glabrata BGLB001215 I 0.713
BGLB010651 Biomphalaria glabrata BGLB010651 I 0.713
TTRE_0000645601 Trichuris trichiura TTRE_0000645601 I 0.713
D918_06928 Trichuris suis D918_06928 I 0.713
CapteG167863 Capitella teleta CapteG167863 I 0.713
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I 0.713
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.713
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.713
ISCW001846 Ixodes scapularis ISCW001846 I 0.703
TMUE_s0173000400 Trichuris muris TMUE_s0173000400 I 0.703
TriadG49742 Trichoplax adhaerens TriadG49742 I 0.703
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I 0.703
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.703
XP_002160208.1 Hydra magnipapillata XP_002160208.1 I 0.703
smad3b Oryzias latipes ENSORLG00000006803 I 0.703