si:dkey-239n17.4 (Danio rerio)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSDARG00000070428 T324565_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad4
M05889_2.00
Mus musculus
KCYAGACR

YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
0.951 0.951
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN

NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
0.951 0.951
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN

NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
0.951 0.951
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS

SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
0.951 0.951
SMAD4
M11275_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
0.951 0.951
SMAD4
M11276_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
0.951 0.951
SMAD4
M11277_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
0.951 0.951
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT

ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.931 0.931
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY

RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.931 0.931
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000094118 SMAD 32 133
ENSDARP00000124579 SMAD 32 133

Links

Other SMAD family TFs
Other Danio rerio TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL013896 Aedes aegypti AAEL013896 I 0.941
AAH84196 Xenopus laevis AAH84196 I 0.951
AALB009485 Anopheles albimanus AALB009485 I 0.922
AARA004719 Anopheles arabiensis AARA004719 I 0.941
AATE010695 Anopheles atroparvus AATE010695 I 0.941
ACEP19585 Atta cephalotes ACEP19585 I 0.814
ACHR000067 Anopheles christyi ACHR000067 I 0.941
ACOM037505 Anopheles coluzzii ACOM037505 I 0.941
ACUA025512 Anopheles culicifacies ACUA025512 I 0.941
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.931
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.882
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.873
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I 0.873
ADAC007516 Anopheles darlingi ADAC007516 I 0.922
ADIR002761 Anopheles dirus ADIR002761 I 0.941
AEPI002385 Anopheles epiroticus AEPI002385 I 0.941
AFAF011208 Anopheles farauti AFAF011208 I 0.941
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.951
AFUN009864 Anopheles funestus AFUN009864 I 0.941
AGAP002902 Anopheles gambiae AGAP002902 I 0.941
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I 0.863
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.951
AMAM019778 Anopheles maculatus AMAM019778 I 0.941
AMEM015931 Anopheles merus AMEM015931 I 0.941
AMIN000723 Anopheles minimus AMIN000723 I 0.941
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.853
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.853
Aqu1.229767 Amphimedon queenslandica Aqu1.229767 I 0.735
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.941
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.804
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.941
ASU_13433 Ascaris suum ASU_13433 I 0.775
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.941
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.951
Bm3575 Brugia malayi Bm3575 I 0.775
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.951
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.775
CapteG179368 Capitella teleta CapteG179368 I 0.922
CBN31444 Caenorhabditis brenneri CBN31444 I 0.706
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.931
CLEC002594 Cimex lectularius CLEC002594 I 0.931
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.951
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.931
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.931
D915_03789 Fasciola hepatica D915_03789 I 0.814
D917_09719 Trichinella nativa D917_09719 I 0.824
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.941
ECPE_0001832001 Echinostoma caproni ECPE_0001832001 I 0.804
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.775
EFV62078 Trichinella spiralis EFV62078 I 0.824
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.951
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I 0.990
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I 0.990
ENSAMXG00000019219 Astyanax mexicanus ENSAMXG00000019219 I 0.941
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.951
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.951
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.882
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.922
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.951
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.980
ENSGMOG00000005844 Gadus morhua ENSGMOG00000005844 I 0.951
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.951
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I 0.951
ENSLOCG00000012872 Lepisosteus oculatus ENSLOCG00000012872 I 0.755
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.922
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.951
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.951
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.951
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.951
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.951
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.971
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.951
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.941
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.951
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.951
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.951
ENSPFOG00000018987 Poecilia formosa ENSPFOG00000018987 I 0.941
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.941
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.912
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.931
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.922
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.951
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.951
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.951
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.951
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.951
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.941
ENSXMAG00000015245 Xiphophorus maculatus ENSXMAG00000015245 I 0.941
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I 0.941
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.902
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.931
GB50071 Apis mellifera GB50071 I 0.931
gb:cr929477 Takifugu rubripes ENSTRUG00000011769 I 0.922
gb:cr929477 Tetraodon nigroviridis ENSTNIG00000003193 I 0.922
GE10952 Drosophila yakuba FBgn0228782 I 0.931
GF22974 Drosophila ananassae FBgn0099968 I 0.931
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.951
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.951
GG11819 Drosophila erecta FBgn0104114 I 0.931
GH18642 Drosophila grimshawi FBgn0126109 I 0.931
GI23400 Drosophila mojavensis FBgn0146126 I 0.931
GJ23092 Drosophila virilis FBgn0210194 I 0.931
GK11724 Drosophila willistoni FBgn0213735 I 0.931
GL23637 Drosophila persimilis FBgn0161227 I 0.931
GM16436 Drosophila sechellia FBgn0171351 I 0.931
GPLIN_000772200 Globodera pallida GPLIN_000772200 I 0.716
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.794
HelroG76435 Helobdella robusta HelroG76435 I 0.804
HelroG88197 Helobdella robusta HelroG88197 I 0.863
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.941
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.931
HMEL002203 Heliconius melpomene HMEL002203 I 0.941
HmN_000727600 Hymenolepis microstoma HmN_000727600 N 0.706
HNAJ_0000282001 Hymenolepis nana HNAJ_0000282001 N 0.706
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.931
ISCW018468 Ixodes scapularis ISCW018468 I 0.951
KGM_12572 Danaus plexippus KGM_12572 I 0.941
L798_13939 Zootermopsis nevadensis L798_13939 I 0.941
L889_g22387 Steinernema feltiae L889_g22387 I 0.703
L893_g15056 Steinernema glaseri L893_g15056 I 0.706
LCUP007928 Lucilia cuprina LCUP007928 I 0.931
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.931
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.951
LOAG_08923 Loa loa LOAG_08923 I 0.755
LotgiG131078 Lottia gigantea LotgiG131078 I 0.941
MCINX014520 Melitaea cinxia MCINX014520 I 0.941
MDOA012885 Musca domestica MDOA012885 I 0.931
Med Drosophila melanogaster FBgn0011655 D 0.931
ML02191a Mnemiopsis leidyi ML02191a I 0.863
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.951
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.775
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.775
NEMVEDRAFT_v1g18576 Nematostella vectensis NEMVEDRAFT_v1g18576 I 0.765
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.892
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.775
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.765
NV12984 Nasonia vitripennis NV12984 I 0.931
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.941
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.961
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.951
PHUM002670 Pediculus humanus PHUM002670 I 0.941
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.951
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.951
RPRC010188 Rhodnius prolixus RPRC010188 I 0.931
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.902
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I 0.990
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I 0.990
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I 0.990
SINV15516 Solenopsis invicta SINV15516 I 0.931
Sjc_0030450 Schistosoma japonicum Sjc_0030450 I 0.755
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.951
SMAD4 Homo sapiens ENSG00000141646 D 0.951
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.951
SMAD4 Equus caballus ENSECAG00000017857 I 0.951
SMAD4 Felis catus ENSFCAG00000005257 I 0.951
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.951
Smad4 Dipodomys ordii ENSDORG00000009089 I 0.941
SMAD4 Danio rerio ENSDARG00000012649 I 0.941
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.951
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.941
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.951
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.941
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.951
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.951
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.951
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.951
smad4 Ciona intestinalis ENSCING00000005559 I 0.882
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.951
SMAD4 Bos taurus ENSBTAG00000006919 I 0.951
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.951
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.941
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.951
Smad4 Mus musculus ENSMUSG00000024515 D 0.951
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.951
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.951
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.951
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.951
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.951
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.951
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.951
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.951
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.951
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.951
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.951
smad4.2.L Xenopus laevis XB-GENE-6256010 I 0.971
smad4.2.S Xenopus laevis XB-GENE-5995204 I 0.971
smad4a Oryzias latipes ENSORLG00000005020 I 0.941
smad4a Gasterosteus aculeatus ENSGACG00000007495 I 0.951
smad4a Danio rerio ENSDARG00000075226 I 0.941
SMAR013850 Strigamia maritima SMAR013850 I 0.941
Smp_033950 Schistosoma mansoni Smp_033950 I 0.725
SMTD_0002197901 Schistosoma mattheei SMTD_0002197901 I 0.725
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.824
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.931
SROB_0000384401 Schistosoma rodhaini SROB_0000384401 I 0.716
T265_11013 Opisthorchis viverrini T265_11013 I 0.804
TC010848 Tribolium castaneum TC010848 I 0.931
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.765
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.912
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.833
TRE_0001987301 Trichobilharzia regenti TRE_0001987301 I 0.775
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.814
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.833
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.765
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.765
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.853
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.922
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.882