Smad4 (Dipodomys ordii)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSDORG00000009089 T324581_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad4
M05889_2.00
Mus musculus
KCYAGACR

YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
1.000 1.000
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN

NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
1.000 1.000
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN

NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
1.000 1.000
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS

SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
1.000 1.000
SMAD4
M11275_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
1.000 1.000
SMAD4
M11276_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
1.000 1.000
SMAD4
M11277_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
1.000 1.000
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT

ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.960 0.960
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY

RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.960 0.960
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000008535 SMAD 36 136

Links

Other SMAD family TFs
Other Dipodomys ordii TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O9_10787 Exophiala aquamarina A1O9_10787 N 0.000
e_gw1.00083.293.1 Aspergillus carbonarius e_gw1.00083.293.1 N 0.000
PTT_20303 Pyrenophora teres PTT_20303 N 0.000
PEX1_024560 Penicillium expansum PEX1_024560 N 0.000
PDIP_39480 Penicillium digitatum PDIP_39480 N 0.000
PDE_07989 Penicillium oxalicum PDE_07989 N 0.000
MPH_03433 Macrophomina phaseolina MPH_03433 N 0.000
CADAORAG00007625 Aspergillus oryzae CADAORAG00007625 N 0.000
ANIA_00585 Aspergillus nidulans CADANIAG00002091 N 0.000
CADANGAG00007095 Aspergillus niger CADANGAG00007095 N 0.000
AFUA_6G11110 Aspergillus fumigatus CADAFUAG00001734 N 0.000
CADAFLAG00004656 Aspergillus flavus CADAFLAG00004656 N 0.000
ACLA_084770 Aspergillus clavatus CADACLAG00008193 N 0.000
Pc21g21680 Penicillium chrysogenum Pc21g21680 N 0.000