smad4a (Oryzias latipes)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSORLG00000005020 T324844_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad4
M05889_2.00
Mus musculus
KCYAGACR

YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
0.990 0.990
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN

NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
0.990 0.990
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN

NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
0.990 0.990
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS

SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
0.990 0.990
SMAD4
M11275_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
0.990 0.990
SMAD4
M11276_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
0.990 0.990
SMAD4
M11277_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
0.990 0.990
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT

ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.971 0.971
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY

RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.971 0.971
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006328 SMAD 33 134

Links

Other SMAD family TFs
Other Oryzias latipes TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPFOG00000018987 Poecilia formosa ENSPFOG00000018987 I 1.000
ENSAMXG00000019219 Astyanax mexicanus ENSAMXG00000019219 I 1.000
smad4a Danio rerio ENSDARG00000075226 I 1.000
ENSXMAG00000015245 Xiphophorus maculatus ENSXMAG00000015245 I 1.000
SMAD4 Homo sapiens ENSG00000141646 D 0.990
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.990
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.990
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.990
smad4a Gasterosteus aculeatus ENSGACG00000007495 I 0.990
SMAD4 Equus caballus ENSECAG00000017857 I 0.990
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.990
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.990
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.990
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.990
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.990
SMAD4 Felis catus ENSFCAG00000005257 I 0.990
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.990
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.990
Smad4 Mus musculus ENSMUSG00000024515 D 0.990
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.990
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.990
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.990
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.990
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.990
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.990
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.990
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.990
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.990
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.990
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.990
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.990
ENSGMOG00000005844 Gadus morhua ENSGMOG00000005844 I 0.990
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.990
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.990
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.990
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.990
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.990
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.990
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.990
AAH84196 Xenopus laevis AAH84196 I 0.990
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.990
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.990
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.990
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.990
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.990
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.990
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.990
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.990
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.990
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.990
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.990
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.990
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.990
SMAD4 Bos taurus ENSBTAG00000006919 I 0.990
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.990
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.990
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.990
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.990
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.990
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.990
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.980
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.980
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.980
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.980
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.980
SMAR013850 Strigamia maritima SMAR013850 I 0.980
SMAD4 Danio rerio ENSDARG00000012649 I 0.980
Smad4 Dipodomys ordii ENSDORG00000009089 I 0.980
PHUM002670 Pediculus humanus PHUM002670 I 0.980
AAEL013896 Aedes aegypti AAEL013896 I 0.980
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.980
L798_13939 Zootermopsis nevadensis L798_13939 I 0.980
GI23400 Drosophila mojavensis FBgn0146126 I 0.971
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.971
GL23637 Drosophila persimilis FBgn0161227 I 0.971
smad4.2.S Xenopus laevis XB-GENE-5995204 I 0.971
smad4.2.L Xenopus laevis XB-GENE-6256010 I 0.971
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.971
GF22974 Drosophila ananassae FBgn0099968 I 0.971
MDOA012885 Musca domestica MDOA012885 I 0.971
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.971
GG11819 Drosophila erecta FBgn0104114 I 0.971
LCUP007928 Lucilia cuprina LCUP007928 I 0.971
GH18642 Drosophila grimshawi FBgn0126109 I 0.971
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.971
SINV15516 Solenopsis invicta SINV15516 I 0.971
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.971
NV12984 Nasonia vitripennis NV12984 I 0.971
GE10952 Drosophila yakuba FBgn0228782 I 0.971
GB50071 Apis mellifera GB50071 I 0.971
TC010848 Tribolium castaneum TC010848 I 0.971
GK11724 Drosophila willistoni FBgn0213735 I 0.971
ISCW018468 Ixodes scapularis ISCW018468 I 0.971
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.971
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.971
GJ23092 Drosophila virilis FBgn0210194 I 0.971
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I 0.971
GM16436 Drosophila sechellia FBgn0171351 I 0.971
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.971
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.971
Med Drosophila melanogaster FBgn0011655 D 0.971
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.971
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I 0.971
AATE010695 Anopheles atroparvus AATE010695 I 0.961
AGAP002902 Anopheles gambiae AGAP002902 I 0.961
AARA004719 Anopheles arabiensis AARA004719 I 0.961
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.961
CLEC002594 Cimex lectularius CLEC002594 I 0.961
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.961
ACHR000067 Anopheles christyi ACHR000067 I 0.961
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.961
ACOM037505 Anopheles coluzzii ACOM037505 I 0.961
AMEM015931 Anopheles merus AMEM015931 I 0.961
AMIN000723 Anopheles minimus AMIN000723 I 0.961
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.961
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.961
AMAM019778 Anopheles maculatus AMAM019778 I 0.961
AFUN009864 Anopheles funestus AFUN009864 I 0.961
ACUA025512 Anopheles culicifacies ACUA025512 I 0.961
ADIR002761 Anopheles dirus ADIR002761 I 0.961
AEPI002385 Anopheles epiroticus AEPI002385 I 0.961
AFAF011208 Anopheles farauti AFAF011208 I 0.961
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.961
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.961
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.961
gb:cr929477 Tetraodon nigroviridis ENSTNIG00000003193 I 0.961
HMEL002203 Heliconius melpomene HMEL002203 I 0.961
gb:cr929477 Takifugu rubripes ENSTRUG00000011769 I 0.961
RPRC010188 Rhodnius prolixus RPRC010188 I 0.961
MCINX014520 Melitaea cinxia MCINX014520 I 0.961
KGM_12572 Danaus plexippus KGM_12572 I 0.961
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I 0.951
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I 0.951
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.951
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I 0.951
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I 0.951
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.951
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I 0.951
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.951
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.941
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.941
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.941
AALB009485 Anopheles albimanus AALB009485 I 0.941
CapteG179368 Capitella teleta CapteG179368 I 0.941
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.941
ADAC007516 Anopheles darlingi ADAC007516 I 0.941
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.941
si:dkey-239n17.4 Danio rerio ENSDARG00000070428 I 0.941
smad4 Ciona intestinalis ENSCING00000005559 I 0.931
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.931
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.931
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.931
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.931
LotgiG131078 Lottia gigantea LotgiG131078 I 0.931
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.922
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.912
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.912
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.912
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.902
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.892
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I 0.892
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I 0.882
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.882
HelroG88197 Helobdella robusta HelroG88197 I 0.873
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.873
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.863
ML02191a Mnemiopsis leidyi ML02191a I 0.853
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.853
ACEP19585 Atta cephalotes ACEP19585 I 0.853
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.853
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.824
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.824
D917_09719 Trichinella nativa D917_09719 I 0.814
EFV62078 Trichinella spiralis EFV62078 I 0.814
T265_11013 Opisthorchis viverrini T265_11013 I 0.814
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.814
ECPE_0001832001 Echinostoma caproni ECPE_0001832001 I 0.804
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.804
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.804
D915_03789 Fasciola hepatica D915_03789 I 0.794
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.794
HelroG76435 Helobdella robusta HelroG76435 I 0.794
ENSLOCG00000012872 Lepisosteus oculatus ENSLOCG00000012872 I 0.794
TRE_0001987301 Trichobilharzia regenti TRE_0001987301 I 0.784
Bm3575 Brugia malayi Bm3575 I 0.784
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.784
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.775
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.775
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.775
NEMVEDRAFT_v1g18576 Nematostella vectensis NEMVEDRAFT_v1g18576 I 0.775
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.775
ASU_13433 Ascaris suum ASU_13433 I 0.775
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.775
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.765
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.765
LOAG_08923 Loa loa LOAG_08923 I 0.765
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.765
Sjc_0030450 Schistosoma japonicum Sjc_0030450 I 0.765
tetur10g00380 Tetranychus urticae tetur10g00380 I 0.756
Sakowv30001112m.g Saccoglossus kowalevskii Sakowv30001112m.g I 0.746
Aqu1.229767 Amphimedon queenslandica Aqu1.229767 I 0.735
SMTD_0002197901 Schistosoma mattheei SMTD_0002197901 I 0.735
Smp_033950 Schistosoma mansoni Smp_033950 I 0.735
SROB_0000384401 Schistosoma rodhaini SROB_0000384401 I 0.725
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I 0.706
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I 0.706
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I 0.706
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I 0.706