ENSSTOG00000028580 (Ictidomys tridecemlineatus)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSSTOG00000028580 T324970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad4
M05889_2.00
Mus musculus
KCYAGACR

YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
1.000 1.000
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN

NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
1.000 1.000
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN

NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
1.000 1.000
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS

SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
1.000 1.000
SMAD4
M11275_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
1.000 1.000
SMAD4
M11276_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
1.000 1.000
SMAD4
M11277_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
1.000 1.000
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT

ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.961 0.961
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY

RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.961 0.961
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000016654 SMAD 33 134

Links

Other SMAD family TFs
Other Ictidomys tridecemlineatus TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASIM_0001286201 Anisakis simplex ASIM_0001286201 N 0.000
ASU_12315 Ascaris suum ASU_12315 N 0.000
Bm4554 Brugia malayi Bm4554 N 0.000
BTMF_0000886001 Brugia timori BTMF_0000886001 N 0.000
nDi.2.2.2.g04767 Dirofilaria immitis nDi.2.2.2.g04767 N 0.000
EEL_0000313301 Elaeophora elaphi EEL_0000313301 N 0.000
GPUH_0000349001 Gongylonema pulchrum GPUH_0000349001 N 0.000
nLs.2.1.2.g00174 Litomosoides sigmodontis nLs.2.1.2.g00174 N 0.000
LOAG_15758 Loa loa LOAG_15758 N 0.000
OFLC_0001184401 Onchocerca flexuosa OFLC_0001184401 N 0.000
nOo.2.0.1.g12737 Onchocerca ochengi nOo.2.0.1.g12737 N 0.000
WBGene00239063 Onchocerca volvulus WBGene00239063 N 0.000
scaffold491-EXSNAP2012.2 Pristionchus exspectatus scaffold491-EXSNAP2012.2 N 0.000
PPA00214 Pristionchus pacificus PPA00214 N 0.000
L596_g18701 Steinernema carpocapsae L596_g18701 N 0.000
L893_g349 Steinernema glaseri L893_g349 N 0.000
L898_g6331 Steinernema monticolum L898_g6331 N 0.000
L892_g2112 Steinernema scapterisci L892_g2112 N 0.000
TCLT_0000041401 Thelazia callipaeda TCLT_0000041401 N 0.000
TCNE_0001731101 Toxocara canis TCNE_0001731101 N 0.000
WUBG_04546 Wuchereria bancrofti WUBG_04546 N 0.000