NFIB (Taeniopygia guttata)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSTGUG00000004639 T324982_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFIB
M03479_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIB_1 		0.989 0.989
NFIB
M05747_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIB_FL_HT-SELEX 		0.989 0.989
Nfib
M09381_2.00 		Mus musculus
BVWGCCARV
BYTGGCWBV		 Misc
Kulakovskiy et al.(2013)
NFIB_MOUSE.H11MO.0.C 		0.989 0.989
NFIB
M11280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6_01 		0.989 0.989
NFIB
M11281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6 		0.989 0.989
NFIB
M05748_2.00 		Homo sapiens
NTTGGCDNNNTGCCARN
NYTGGCANNNHGCCAAN		 SELEX
Yin et al.(2017)
NFIB_FL_Methyl-HT-SELEX 		0.989 0.989
NFIA
M03480_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIA_1 		0.923 0.923
NFIA
M03481_2.00 		Homo sapiens
NNTGCCAANN
NNTTGGCANN		 SELEX
Jolma et al.(2013)
NFIA_2 		0.923 0.923
NFIA
M09379_2.00 		Homo sapiens
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C 		0.923 0.923
Nfia
M09383_2.00 		Mus musculus
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C 		0.923 0.923
NFIA
M11282_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1A_Q6_01 		0.923 0.923
Nfia
M11291_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFIA_02 		0.923 0.923
NFIX
M03475_2.00 		Homo sapiens
YTGGCNNNNTGCCAA
TTGGCANNNNGCCAR		 SELEX
Jolma et al.(2013)
NFIX_1 		0.912 0.912
NFIX
M03476_2.00 		Homo sapiens
NYTGGCDNN
NNHGCCARN		 SELEX
Jolma et al.(2013)
NFIX_2 		0.912 0.912
NFIX
M03477_2.00 		Homo sapiens
NYTGGCWNN
NNWGCCARN		 SELEX
Jolma et al.(2013)
NFIX_3 		0.912 0.912
NFIX
M03478_2.00 		Homo sapiens
TTGGCANNNTGCCAR
YTGGCANNNTGCCAA		 SELEX
Jolma et al.(2013)
NFIX_4 		0.912 0.912
NFIX
M05741_2.00 		Homo sapiens
NHTGGCDNNNTGCCADN
NHTGGCANNNHGCCADN		 SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX 		0.912 0.912
NFIX
M05742_2.00 		Homo sapiens
NYTGGCDNNNTGCCARN
NYTGGCANNNHGCCARN		 SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX 		0.912 0.912
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.813 0.813
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.802 0.802
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.802 0.802
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.802 0.802
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.802 0.802
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.802 0.802
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.802 0.802
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.802 0.802
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.802 0.802
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000004806 SMAD 69 173

Links

Other SMAD family TFs
Other Taeniopygia guttata TFs

331 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011750 Calypte anna Aan_R011750 N 0.000
Afo_R006263 Aptenodytes forsteri Afo_R006263 N 0.000
Alligator_sinensis_CCG011535.1 Alligator sinensis Alligator_sinensis_CCG011535.1 N 0.000
ENSAMEG00000012706 Ailuropoda melanoleuca ENSAMEG00000012706 N 0.000
ENSAPLG00000008722 Anas platyrhynchos ENSAPLG00000008722 N 0.000
AEBP2 Bos taurus ENSBTAG00000010818 N 0.000
AEBP2 Canis familiaris ENSCAFG00000012441 N 0.000
ENSCJAG00000001342 Callithrix jacchus ENSCJAG00000001342 N 0.000
AEBP2 Cavia porcellus ENSCPOG00000007440 N 0.000
ENSCSAG00000008085 Chlorocebus sabaeus ENSCSAG00000008085 N 0.000
AEBP2 Dasypus novemcinctus ENSDNOG00000014519 N 0.000
AEBP2 Equus caballus ENSECAG00000012977 N 0.000
ENSETEG00000006095 Echinops telfairi ENSETEG00000006095 N 0.000
ENSFALG00000001055 Ficedula albicollis ENSFALG00000001055 N 0.000
AEBP2 Felis catus ENSFCAG00000031640 N 0.000
AEBP2 Homo sapiens ENSG00000139154 N 0.000
ENSGALG00000013136 Gallus gallus ENSGALG00000013136 N 0.000
AEBP2 Gorilla gorilla ENSGGOG00000002023 N 0.000
ENSLACG00000010628 Latimeria chalumnae ENSLACG00000010628 N 0.000
AEBP2 Loxodonta africana ENSLAFG00000020685 N 0.000
ENSLOCG00000015421 Lepisosteus oculatus ENSLOCG00000015421 N 0.000
ENSMEUG00000010574 Macropus eugenii ENSMEUG00000010574 N 0.000
ENSMGAG00000013591 Meleagris gallopavo ENSMGAG00000013591 N 0.000
AEBP2 Myotis lucifugus ENSMLUG00000006293 N 0.000
AEBP2 Macaca mulatta ENSMMUG00000016243 N 0.000
ENSMODG00000017867 Monodelphis domestica ENSMODG00000017867 N 0.000
ENSMPUG00000011420 Mustela putorius furo ENSMPUG00000011420 N 0.000
Aebp2 Mus musculus ENSMUSG00000030232 N 0.000
ENSNLEG00000004553 Nomascus leucogenys ENSNLEG00000004553 N 0.000
ENSOARG00000020470 Ovis aries ENSOARG00000020470 N 0.000
ENSOCUG00000016677 Oryctolagus cuniculus ENSOCUG00000016677 N 0.000
AEBP2 Otolemur garnettii ENSOGAG00000017202 N 0.000
ENSP00000381840 Macaca fascicularis ENSP00000381840 N 0.000
ENSP00000381840-D1 Bos grunniens ENSP00000381840-D1 N 0.000
ENSPANG00000010276 Papio anubis ENSPANG00000010276 N 0.000
ENSPPYG00000004345 Pongo abelii ENSPPYG00000004345 N 0.000
ENSPSIG00000002184 Pelodiscus sinensis ENSPSIG00000002184 N 0.000
AEBP2 Pan troglodytes ENSPTRG00000004747 N 0.000
AEBP2 Pteropus vampyrus ENSPVAG00000008104 N 0.000
Aebp2 Rattus norvegicus ENSRNOG00000008929 N 0.000
ENSSARG00000010983 Sorex araneus ENSSARG00000010983 N 0.000
ENSSHAG00000018345 Sarcophilus harrisii ENSSHAG00000018345 N 0.000
AEBP2 Sus scrofa ENSSSCG00000000587 N 0.000
AEBP2 Taeniopygia guttata ENSTGUG00000012348 N 0.000
AEBP2 Tursiops truncatus ENSTTRG00000011776 N 0.000
ENSVPAG00000008562 Vicugna pacos ENSVPAG00000008562 N 0.000
Gfo_R002231 Geospiza fortis Gfo_R002231 N 0.000
Myotis_brandtii_PLEKHA5_10031422 Myotis brandtii Myotis_brandtii_PLEKHA5_10031422 N 0.000
Tal_R009212 Tyto alba Tal_R009212 N 0.000
aebp2.L Xenopus laevis XB-GENE-6251879 N 0.000