ENSP00000342859-D1 (Bos grunniens)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 ENSP00000342859-D1 T325297_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFIC
M05745_2.00
Homo sapiens
NTTGGCNNNNTGCCARN

NYTGGCANNNNGCCAAN
SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX
0.989 0.989
NFIC
M08164_2.00
Homo sapiens
NNCTTGGCANN

NNTGCCAAGNN
ChIP-seq
Mathelier et al.(2014)
MA0161.2
0.989 0.989
NFIC
M09378_2.00
Homo sapiens
BYTGGMHBYNDKCCMRV

BYKGGMHNRVDKCCARV
Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A
0.989 0.989
Nfic
M09385_2.00
Mus musculus
NBYTGGCWN

NWGCCARVN
Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A
0.989 0.989
NFIC
M09635_2.00
Homo sapiens
BYTGSCAV

BTGSCARV
Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished
0.989 0.989
NFIC
M09636_2.00
Homo sapiens
BYTGGCHNNNDGCCAR

YTGGCHNNNDGCCARV
Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished
0.989 0.989
NFIC
M11278_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTF1_01
0.989 0.989
NFIC
M11279_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NF1C_Q6
0.989 0.989
NFIC
M05746_2.00
Homo sapiens
NYTGGCNNNNYGCCARN

NYTGGCRNNNNGCCARN
SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX
0.989 0.989
NFIA
M03480_2.00
Homo sapiens
YTGGCANNNTGCCAA

TTGGCANNNTGCCAR
SELEX
Jolma et al.(2013)
NFIA_1
0.857 0.857
NFIA
M03481_2.00
Homo sapiens
NNTGCCAANN

NNTTGGCANN
SELEX
Jolma et al.(2013)
NFIA_2
0.857 0.857
NFIA
M09379_2.00
Homo sapiens
YTGGCWNYNDGCCAD

HTGGCHNRNWGCCAR
Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C
0.857 0.857
Nfia
M09383_2.00
Mus musculus
YTGGCWNYNDGCCAD

HTGGCHNRNWGCCAR
Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C
0.857 0.857
NFIA
M11282_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NF1A_Q6_01
0.857 0.857
Nfia
M11291_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFIA_02
0.857 0.857
NFIX
M03475_2.00
Homo sapiens
YTGGCNNNNTGCCAA

TTGGCANNNNGCCAR
SELEX
Jolma et al.(2013)
NFIX_1
0.835 0.835
NFIX
M03476_2.00
Homo sapiens
NYTGGCDNN

NNHGCCARN
SELEX
Jolma et al.(2013)
NFIX_2
0.835 0.835
NFIX
M03477_2.00
Homo sapiens
NYTGGCWNN

NNWGCCARN
SELEX
Jolma et al.(2013)
NFIX_3
0.835 0.835
NFIX
M03478_2.00
Homo sapiens
TTGGCANNNTGCCAR

YTGGCANNNTGCCAA
SELEX
Jolma et al.(2013)
NFIX_4
0.835 0.835
NFIX
M05741_2.00
Homo sapiens
NHTGGCDNNNTGCCADN

NHTGGCANNNHGCCADN
SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX
0.835 0.835
NFIX
M05742_2.00
Homo sapiens
NYTGGCDNNNTGCCARN

NYTGGCANNNHGCCARN
SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX
0.835 0.835
NfI
M03968_2.00
Drosophila melanogaster
YTGGCDNNNHGCCAR

YTGGCDNNNHGCCAR
SELEX
Nitta et al.(2015)
NfI_1
0.813 0.813
NFIB
M03479_2.00
Homo sapiens
YTGGCANNNTGCCAA

TTGGCANNNTGCCAR
SELEX
Jolma et al.(2013)
NFIB_1
0.802 0.802
NFIB
M05747_2.00
Homo sapiens
NYTGGCNNNNYGCCARN

NYTGGCRNNNNGCCARN
SELEX
Yin et al.(2017)
NFIB_FL_HT-SELEX
0.802 0.802
Nfib
M09381_2.00
Mus musculus
BVWGCCARV

BYTGGCWBV
Misc
Kulakovskiy et al.(2013)
NFIB_MOUSE.H11MO.0.C
0.802 0.802
NFIB
M11280_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NF1B_Q6_01
0.802 0.802
NFIB
M11281_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NF1B_Q6
0.802 0.802
NFIB
M05748_2.00
Homo sapiens
NTTGGCDNNNTGCCARN

NYTGGCANNNHGCCAAN
SELEX
Yin et al.(2017)
NFIB_FL_Methyl-HT-SELEX
0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000342859-D1 SMAD 60 164

Links

Other SMAD family TFs
Other Bos grunniens TFs

365 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Adnp2 Mus musculus ENSMUSG00000053950 N 0.000
ADNP2 Tupaia belangeri ENSTBEG00000001298 N 0.000
ADNP2 Myotis lucifugus ENSMLUG00000006751 N 0.000
ADNP2 Macaca mulatta ENSMMUG00000013710 N 0.000
ADNP2 Monodelphis domestica ENSMODG00000011929 N 0.000
Adnp2 Rattus norvegicus ENSRNOG00000053370 N 0.000
ADNP2 Pteropus vampyrus ENSPVAG00000009159 N 0.000
ADNP2 Pan troglodytes ENSPTRG00000010138 N 0.000
ADNP2 Ochotona princeps ENSOPRG00000000455 N 0.000
ADNP2 Oryctolagus cuniculus ENSOCUG00000009233 N 0.000
ADNP2 Loxodonta africana ENSLAFG00000001597 N 0.000
ADNP2 Gorilla gorilla ENSGGOG00000003551 N 0.000
ADNP2 Homo sapiens ENSG00000101544 N 0.000
ADNP2 Bos taurus ENSBTAG00000005916 N 0.000
ADNP2 Canis familiaris ENSCAFG00000000007 N 0.000
ADNP2 Choloepus hoffmanni ENSCHOG00000012944 N 0.000
ADNP2 Callithrix jacchus ENSCJAG00000010119 N 0.000
ADNP2 Vicugna pacos ENSVPAG00000001203 N 0.000
ADNP2 Tursiops truncatus ENSTTRG00000002400 N 0.000
ADNP2 Dasypus novemcinctus ENSDNOG00000003747 N 0.000
ADNP2 Equus caballus ENSECAG00000008310 N 0.000
ADNP2 Felis catus ENSFCAG00000022677 N 0.000
ADNP2 Otolemur garnettii ENSOGAG00000032513 N 0.000
ENSAMEG00000010404 Ailuropoda melanoleuca ENSAMEG00000010404 N 0.000
ENSCPOG00000005011 Cavia porcellus ENSCPOG00000005011 N 0.000
ENSCSAG00000018257 Chlorocebus sabaeus ENSCSAG00000018257 N 0.000
ENSMEUG00000007373 Macropus eugenii ENSMEUG00000007373 N 0.000
ENSMPUG00000016665 Mustela putorius furo ENSMPUG00000016665 N 0.000
ENSNLEG00000008406 Nomascus leucogenys ENSNLEG00000008406 N 0.000
ENSOARG00000004037 Ovis aries ENSOARG00000004037 N 0.000
ENSPANG00000011713 Papio anubis ENSPANG00000011713 N 0.000
ENSPPYG00000009265 Pongo abelii ENSPPYG00000009265 N 0.000
ENSSHAG00000005235 Sarcophilus harrisii ENSSHAG00000005235 N 0.000
ENSSSCG00000005774 Sus scrofa ENSSSCG00000005774 N 0.000
ENSSTOG00000025747 Ictidomys tridecemlineatus ENSSTOG00000025747 N 0.000
Myotis_brandtii_ADNP2_10034220 Myotis brandtii Myotis_brandtii_ADNP2_10034220 N 0.000