Ogr07750 (Ophisaurus gracilis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Ogr07750 T325335_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN

NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.771 0.771
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA

TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.771 0.771
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.771 0.771
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.771 0.771
Smad3
M09637_2.00
Mus musculus
BYAGMCWN

NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.771 0.771
SMAD3
M11283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.771 0.771
SMAD3
M11284_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.771 0.771
SMAD3
M11285_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr07750 SMAD 31 78

Links

Other SMAD family TFs
Other Ophisaurus gracilis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gfo_R000026 Geospiza fortis Gfo_R000026 I 0.960
Brh_R001114 Buceros rhinoceros Brh_R001114 I 0.895
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I 0.895
ENSOARG00000018267 Ovis aries ENSOARG00000018267 I 0.872
Tal_R011237 Tyto alba Tal_R011237 I 0.868
ACEP23524 Atta cephalotes ACEP23524 I 0.868
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I 0.868
Tal_R000062 Tyto alba Tal_R000062 I 0.857
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.771
Aan_R005610 Calypte anna Aan_R005610 I 0.771
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.771
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.771
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.771
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.771
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.771
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.771
smad3a Danio rerio ENSDARG00000036096 I 0.771
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.750
SMAD2 Microcebus murinus ENSMICG00000007882 I 0.744
CpipJ_CPIJ018354 Culex pipiens CpipJ_CPIJ018354 I 0.744
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.729
SMAR008230 Strigamia maritima SMAR008230 I 0.729
L798_14024 Zootermopsis nevadensis L798_14024 I 0.729
PPAI005080 Phlebotomus papatasi PPAI005080 I 0.718