Tal_R000062 (Tyto alba)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Tal_R000062 T325346_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN

NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.943 0.943
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA

TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.943 0.943
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.943 0.943
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.943 0.943
Smad3
M09637_2.00
Mus musculus
BYAGMCWN

NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.943 0.943
SMAD3
M11283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.943 0.943
SMAD3
M11284_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.943 0.943
SMAD3
M11285_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.943 0.943
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R000062 SMAD 35 69

Links

Other SMAD family TFs
Other Tyto alba TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 1.000
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 1.000
Gfo_R000026 Geospiza fortis Gfo_R000026 I 1.000
Aan_R002236 Calypte anna Aan_R002236 I 1.000
smad2.S Xenopus laevis XB-GENE-864923 I 1.000
AAB39329 Xenopus laevis AAB39329 I 1.000
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.971
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.943
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.943
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I 0.943
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.943
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.943
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.943
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.943
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.943
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.943
ENSP00000332973 Macaca fascicularis ENSP00000332973 I 0.943
Aan_R005610 Calypte anna Aan_R005610 I 0.943
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.943
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.943
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.943
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.943
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.943
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.943
Tal_R011237 Tyto alba Tal_R011237 I 0.921
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I 0.921
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.914
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.914
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.914
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.914
smad3a Danio rerio ENSDARG00000036096 I 0.914
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.914
CpipJ_CPIJ018354 Culex pipiens CpipJ_CPIJ018354 I 0.886
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.886
SMAR008230 Strigamia maritima SMAR008230 I 0.886
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.886
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I 0.868
Brh_R001114 Buceros rhinoceros Brh_R001114 I 0.868
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.857
Ogr07750 Ophisaurus gracilis Ogr07750 I 0.857
ENSOARG00000018267 Ovis aries ENSOARG00000018267 I 0.846
smad3 Xenopus tropicalis XB-GENE-481992 I 0.829
L798_14024 Zootermopsis nevadensis L798_14024 I 0.829
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I 0.829
GB42212 Apis mellifera GB42212 N 0.829
SINV22770 Solenopsis invicta SINV22770 I 0.800
SMAD2 Microcebus murinus ENSMICG00000007882 I 0.791
YQE_05290 Dendroctonus ponderosae YQE_05290 N 0.771
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.771
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.771
ACEP23524 Atta cephalotes ACEP23524 I 0.763
BGIBMGA009650 Bombyx mori BGIBMGA009650 N 0.743
GH24864 Drosophila grimshawi FBgn0132319 N 0.743
D918_09504 Trichuris suis D918_09504 I 0.743
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I 0.743
CLEC004107 Cimex lectularius CLEC004107 I 0.743
CapteG167863 Capitella teleta CapteG167863 I 0.743
BTMF_0000153801 Brugia timori BTMF_0000153801 N 0.714
nOo.2.0.1.g09375 Onchocerca ochengi nOo.2.0.1.g09375 N 0.714
D917_04509 Trichinella nativa D917_04509 I 0.714
GA15332 Drosophila pseudoobscura FBgn0075352 N 0.714
GF20979 Drosophila ananassae FBgn0097984 N 0.714
HelroG185435 Helobdella robusta HelroG185435 I 0.714
LOAG_07479 Loa loa LOAG_07479 N 0.714
WBGene00238556 Onchocerca volvulus WBGene00238556 N 0.714
GK24988 Drosophila willistoni FBgn0226947 N 0.714
GL20193 Drosophila persimilis FBgn0157788 N 0.714
Bm3140 Brugia malayi Bm3140 N 0.714
ISCW001846 Ixodes scapularis ISCW001846 I 0.714
EFV60166 Trichinella spiralis EFV60166 I 0.714
Sakowv30032220m.g Saccoglossus kowalevskii Sakowv30032220m.g I 0.714