HPBE_0001599301 (Heligmosomoides bakeri)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 HPBE_0001599301 T325723_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.714 0.714
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.714 0.714
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.702 0.702
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.702 0.702
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.702 0.702
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.702 0.702
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.702 0.702
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.702 0.702
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001599301-mRNA-1 SMAD 1 84

Links

Other SMAD family TFs
Other Heligmosomoides bakeri TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_04158 Ancylostoma ceylanicum ANCCEY_04158 N 0.976
HCOI00676200 Haemonchus contortus HCOI00676200 I 0.964
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I 0.804
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I 0.804
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I 0.804
ASU_13433 Ascaris suum ASU_13433 I 0.798
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.786
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I 0.784
NBR_0001502601 Nippostrongylus brasiliensis NBR_0001502601 N 0.778
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.774
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.774
L898_g17086 Steinernema monticolum L898_g17086 I 0.726
EVEC_0000355201 Enterobius vermicularis EVEC_0000355201 I 0.717
GH18642 Drosophila grimshawi FBgn0126109 I 0.714
GI23400 Drosophila mojavensis FBgn0146126 I 0.714
GL23637 Drosophila persimilis FBgn0161227 I 0.714
GM16436 Drosophila sechellia FBgn0171351 I 0.714
GJ23092 Drosophila virilis FBgn0210194 I 0.714
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.714
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.714
Med Drosophila melanogaster FBgn0011655 D 0.714
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.714
GF22974 Drosophila ananassae FBgn0099968 I 0.714
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.714
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.714
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.714
MDOA012885 Musca domestica MDOA012885 I 0.714
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.714
LCUP007928 Lucilia cuprina LCUP007928 I 0.714
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.714
GE10952 Drosophila yakuba FBgn0228782 I 0.714
ISCW018468 Ixodes scapularis ISCW018468 I 0.714
TC010848 Tribolium castaneum TC010848 I 0.714
GK11724 Drosophila willistoni FBgn0213735 I 0.714
GG11819 Drosophila erecta FBgn0104114 I 0.714
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.714
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.714
AALB009485 Anopheles albimanus AALB009485 I 0.702
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.702
Minc15475 Meloidogyne incognita Minc15475 N 0.702
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.702
SMAD4 Felis catus ENSFCAG00000005257 I 0.702
SMAD4 Equus caballus ENSECAG00000017857 I 0.702
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.702
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.702
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.702
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.702
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.702
AAH84196 Xenopus laevis AAH84196 I 0.702
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.702
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.702
SMAD4 Homo sapiens ENSG00000141646 D 0.702
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.702
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.702
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.702
SMAD4 Bos taurus ENSBTAG00000006919 I 0.702
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.702
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.702
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.702
ADAC007516 Anopheles darlingi ADAC007516 I 0.702
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N 0.702
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.702
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.702
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.702
smad4 Ciona intestinalis ENSCING00000005559 I 0.702
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N 0.702
L889_g28104 Steinernema feltiae L889_g28104 I 0.702
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.702
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.702
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.702
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.702
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.702
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.702
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.702
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.702
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.702
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.702
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.702
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.702
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.702
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.702
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.702
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.702
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.702
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.702
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.702
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.702
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.702
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.702
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.702
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.702
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.702
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.702
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.702
Smad4 Mus musculus ENSMUSG00000024515 D 0.702
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.702
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.702
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.702
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.702
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.702
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.702