CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g22387
(
Steinernema feltiae
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
L889_g22387
T325749_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.822
0.822
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.713
0.713
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g22387.t1
SMAD
180
280
VKKAIESLVKKLKDKRTELDSLITAVTSAGKHPTSCVTIQRSLDGRLQVAGRKGVPHVVYARIWRWPNVNKNELKKLPSCGITNDNQDLICINPYHYERVV
L889_g22387.t2
SMAD
180
280
VKKAIESLVKKLKDKRTELDSLITAVTSAGKHPTSCVTIQRSLDGRLQVAGRKGVPHVVYARIWRWPNVNKNELKKLPSCGITNDNQDLICINPYHYERVV
Links
Other
SMAD
family TFs
Other
Steinernema feltiae
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy