L892_g4417 (Steinernema scapterisci)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 L892_g4417 T325762_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NfI
M03968_2.00
Drosophila melanogaster
YTGGCDNNNHGCCAR

YTGGCDNNNHGCCAR
SELEX
Nitta et al.(2015)
NfI_1
0.802 0.802
NFIC
M05745_2.00
Homo sapiens
NTTGGCNNNNTGCCARN

NYTGGCANNNNGCCAAN
SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX
0.780 0.780
NFIC
M08164_2.00
Homo sapiens
NNCTTGGCANN

NNTGCCAAGNN
ChIP-seq
Mathelier et al.(2014)
MA0161.2
0.780 0.780
NFIC
M09378_2.00
Homo sapiens
BYTGGMHBYNDKCCMRV

BYKGGMHNRVDKCCARV
Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A
0.780 0.780
Nfic
M09385_2.00
Mus musculus
NBYTGGCWN

NWGCCARVN
Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A
0.780 0.780
NFIC
M09635_2.00
Homo sapiens
BYTGSCAV

BTGSCARV
Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished
0.780 0.780
NFIC
M09636_2.00
Homo sapiens
BYTGGCHNNNDGCCAR

YTGGCHNNNDGCCARV
Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished
0.780 0.780
NFIC
M11278_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTF1_01
0.780 0.780
NFIC
M11279_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NF1C_Q6
0.780 0.780
NFIC
M05746_2.00
Homo sapiens
NYTGGCNNNNYGCCARN

NYTGGCRNNNNGCCARN
SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX
0.780 0.780
NFIA
M03480_2.00
Homo sapiens
YTGGCANNNTGCCAA

TTGGCANNNTGCCAR
SELEX
Jolma et al.(2013)
NFIA_1
0.725 0.725
NFIA
M03481_2.00
Homo sapiens
NNTGCCAANN

NNTTGGCANN
SELEX
Jolma et al.(2013)
NFIA_2
0.725 0.725
NFIA
M09379_2.00
Homo sapiens
YTGGCWNYNDGCCAD

HTGGCHNRNWGCCAR
Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C
0.725 0.725
Nfia
M09383_2.00
Mus musculus
YTGGCWNYNDGCCAD

HTGGCHNRNWGCCAR
Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C
0.725 0.725
NFIA
M11282_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NF1A_Q6_01
0.725 0.725
Nfia
M11291_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFIA_02
0.725 0.725
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g4417.t1 SMAD 61 165
L892_g4417.t2 SMAD 61 165

Links

Other SMAD family TFs
Other Steinernema scapterisci TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g02718 Acanthocheilonema viteae nAv.1.0.1.g02718 I 0.901
ACYPI010036 Acyrthosiphon pisum ACYPI010036 I 0.846
AAEL000254 Aedes aegypti AAEL000254 I 0.725
ENSAMEG00000005577 Ailuropoda melanoleuca ENSAMEG00000005577 I 0.769
ENSAMEG00000011711 Ailuropoda melanoleuca ENSAMEG00000011711 I 0.725
Alligator_sinensis_CCG015706.1 Alligator sinensis Alligator_sinensis_CCG015706.1 I 0.725
Alligator_sinensis_CCG000434.1 Alligator sinensis Alligator_sinensis_CCG000434.1 I 0.747
ENSAPLG00000003407 Anas platyrhynchos ENSAPLG00000003407 I 0.725
ANCCAN_03078 Ancylostoma caninum ANCCAN_03078 I 0.879
ANCDUO_02770 Ancylostoma duodenale ANCDUO_02770 I 0.879
ACAC_0000812601 Angiostrongylus cantonensis ACAC_0000812601 I 0.879
ACOC_0000978701 Angiostrongylus costaricensis ACOC_0000978701 I 0.879
ASIM_0001221201 Anisakis simplex ASIM_0001221201 I 0.912
ENSACAG00000017087 Anolis carolinensis ENSACAG00000017087 I 0.725
AALB006645 Anopheles albimanus AALB006645 I 0.725
AARA001109 Anopheles arabiensis AARA001109 I 0.725
AATE000288 Anopheles atroparvus AATE000288 I 0.725
ACOM036010 Anopheles coluzzii ACOM036010 I 0.725
ACUA022542 Anopheles culicifacies ACUA022542 I 0.725
ACUA012405 Anopheles culicifacies ACUA012405 I 0.726
ADAC002741 Anopheles darlingi ADAC002741 I 0.725
ADIR000974 Anopheles dirus ADIR000974 I 0.725
AEPI005797 Anopheles epiroticus AEPI005797 I 0.725
AFAF009296 Anopheles farauti AFAF009296 I 0.725
AFUN011569 Anopheles funestus AFUN011569 I 0.725
NFI Anopheles gambiae AGAP000068 I 0.725
AMEC001904 Anopheles melas AMEC001904 I 0.726
AMEC002310 Anopheles melas AMEC002310 I 0.725
AMEM002115 Anopheles merus AMEM002115 I 0.725
AMIN002133 Anopheles minimus AMIN002133 I 0.725
ASIS017368 Anopheles sinensis ASIS017368 I 0.725
ASTEI06207 Anopheles stephensi ASTEI06207 I 0.725
GB44961 Apis mellifera GB44961 I 0.846
Afo_R007642 Aptenodytes forsteri Afo_R007642 I 0.747
ASU_05356 Ascaris suum ASU_05356 I 0.912
ENSAMXG00000007288 Astyanax mexicanus ENSAMXG00000007288 I 0.703
ENSAMXG00000003579 Astyanax mexicanus ENSAMXG00000003579 I 0.736
ENSAMXG00000017908 Astyanax mexicanus ENSAMXG00000017908 I 0.725
ACEP19823 Atta cephalotes ACEP19823 I 0.846
BGLB002764 Biomphalaria glabrata BGLB002764 I 0.824
BGIBMGA013352 Bombyx mori BGIBMGA013352 I 0.868
yakG029648 Bos grunniens yakG029648 I 0.725
ENSP00000342859-D1 Bos grunniens ENSP00000342859-D1 I 0.769
NFIA Bos taurus ENSBTAG00000000074 I 0.725
NFIC Bos taurus ENSBTAG00000008520 I 0.769
gw.438.21.1 Branchiostoma floridae gw.438.21.1 I 0.780
fgenesh2_pg.scaffold_342000046 Branchiostoma floridae fgenesh2_pg.scaffold_342000046 I 0.780
Bm7659 Brugia malayi Bm7659 I 0.901
BXY_1713100 Bursaphelenchus xylophilus BXY_1713100 I 0.857
NFIA Callithrix jacchus ENSCJAG00000016165 I 0.725
NFIC Callithrix jacchus ENSCJAG00000014813 I 0.780
Aan_R000637 Calypte anna Aan_R000637 I 0.725
Aan_R011678 Calypte anna Aan_R011678 I 0.747
Cflo_01240--XP_393740.3_APIME Camponotus floridanus Cflo_01240--XP_393740.3_APIME I 0.846
NFIA Canis familiaris ENSCAFG00000023117 I 0.725
NFIC Canis familiaris ENSCAFG00000019246 I 0.769
CapteG107856 Capitella teleta CapteG107856 I 0.780
NFIA Cavia porcellus ENSCPOG00000010091 I 0.725
Cmyd_10002384 Chelonia mydas Cmyd_10002384 I 0.736
ENSCSAG00000001333 Chlorocebus sabaeus ENSCSAG00000001333 I 0.725
ENSCSAG00000011182 Chlorocebus sabaeus ENSCSAG00000011182 I 0.780
ENSCHOG00000006447 Choloepus hoffmanni ENSCHOG00000006447 I 0.769
CGI_10025830 Crassostrea gigas CGI_10025830 I 0.835
CpipJ_CPIJ009526 Culex pipiens CpipJ_CPIJ009526 I 0.725
CPIJ009526 Culex quinquefasciatus CPIJ009526 I 0.725
CGOC_0000769801 Cylicostephanus goldi CGOC_0000769801 I 0.936
nfic Danio rerio ENSDARG00000043210 I 0.747
nfia Danio rerio ENSDARG00000062420 I 0.725
DAPPUDRAFT_244987 Daphnia pulex DAPPUDRAFT_244987 I 0.837
DAPPUDRAFT_52430 Daphnia pulex DAPPUDRAFT_52430 I 0.846
ENSDNOG00000002190 Dasypus novemcinctus ENSDNOG00000002190 I 0.725
NFIC Dasypus novemcinctus ENSDNOG00000042450 I 0.769
YQE_09289 Dendroctonus ponderosae YQE_09289 I 0.868
DICVIV_06041 Dictyocaulus viviparus DICVIV_06041 I 0.879
Nfia Dipodomys ordii ENSDORG00000005150 I 0.725
Nfic Dipodomys ordii ENSDORG00000002466 I 0.769
nDi.2.2.2.g05388 Dirofilaria immitis nDi.2.2.2.g05388 I 0.901
DME_0000465201 Dracunculus medinensis DME_0000465201 I 0.879
GF21690 Drosophila ananassae FBgn0098690 I 0.802
GG16454 Drosophila erecta FBgn0108685 I 0.802
GH23980 Drosophila grimshawi FBgn0131437 I 0.802
NfI Drosophila melanogaster FBgn0042696 D 0.802
GI14107 Drosophila mojavensis FBgn0136861 I 0.802
GL18152 Drosophila persimilis FBgn0155755 I 0.802
GM26787 Drosophila sechellia FBgn0181640 I 0.802
GD24387 Drosophila simulans FBgn0195728 I 0.802
GJ21334 Drosophila virilis FBgn0208464 I 0.802
GK13608 Drosophila willistoni FBgn0215616 I 0.802
GE14520 Drosophila yakuba FBgn0232122 I 0.802
NFIA Echinops telfairi ENSETEG00000017068 I 0.725
NFIC Echinops telfairi ENSETEG00000006952 I 0.769
EEL_0000990501 Elaeophora elaphi EEL_0000990501 I 0.901
EVEC_0001120201 Enterobius vermicularis EVEC_0001120201 I 0.912
NFIC Equus caballus ENSECAG00000008134 I 0.758
NFIA Equus caballus ENSECAG00000015574 I 0.809
NFIB Erinaceus europaeus ENSEEUG00000012997 I 0.795
NFIA Erinaceus europaeus ENSEEUG00000015082 I 0.725
NFIA Felis catus ENSFCAG00000005997 I 0.725
NFIC Felis catus ENSFCAG00000000880 I 0.769
ENSFALG00000011533 Ficedula albicollis ENSFALG00000011533 I 0.747
ENSFALG00000012430 Ficedula albicollis ENSFALG00000012430 I 0.725
ENSGMOG00000005260 Gadus morhua ENSGMOG00000005260 I 0.703
ENSGMOG00000019827 Gadus morhua ENSGMOG00000019827 I 0.714
ENSGALG00000027938 Gallus gallus ENSGALG00000027938 I 0.736
cNFI-A Gallus gallus ENSGALG00000010924 I 0.725
NFIB Gasterosteus aculeatus ENSGACG00000019677 I 0.703
nfia Gasterosteus aculeatus ENSGACG00000003153 I 0.725
nfic Gasterosteus aculeatus ENSGACG00000002028 I 0.758
Gfo_R007599 Geospiza fortis Gfo_R007599 I 0.747
GPUH_0001193601 Gongylonema pulchrum GPUH_0001193601 I 0.800
NFIA Gorilla gorilla ENSGGOG00000027445 I 0.725
NFIC Gorilla gorilla ENSGGOG00000006557 I 0.780
HCOI01452900 Haemonchus contortus HCOI01452900 I 0.868
HHAL002936-PA Halyomorpha halys HHAL002936-PA I 0.846
Hsal_10682--XP_393740.3_APIME Harpegnathos saltator Hsal_10682--XP_393740.3_APIME I 0.846
HMEL003745 Heliconius melpomene HMEL003745 I 0.868
HPBE_0002427601 Heligmosomoides bakeri HPBE_0002427601 I 0.879
NFIC Homo sapiens ENSG00000141905 D 0.780
NFIX Homo sapiens ENSG00000008441 D 0.721
NFIA Homo sapiens ENSG00000162599 D 0.725
ENSSTOG00000024218 Ictidomys tridecemlineatus ENSSTOG00000024218 I 0.769
ISCW004440 Ixodes scapularis ISCW004440 I 0.813
ENSLACG00000004873 Latimeria chalumnae ENSLACG00000004873 I 0.725
ENSLACG00000014913 Latimeria chalumnae ENSLACG00000014913 I 0.736
ENSLOCG00000011325 Lepisosteus oculatus ENSLOCG00000011325 I 0.703
ENSLOCG00000001284 Lepisosteus oculatus ENSLOCG00000001284 I 0.747
ENSLOCG00000009919 Lepisosteus oculatus ENSLOCG00000009919 I 0.725
LDEC011938 Leptinotarsa decemlineata LDEC011938 I 0.868
nLs.2.1.2.g06746 Litomosoides sigmodontis nLs.2.1.2.g06746 I 0.901
LOAG_08303 Loa loa LOAG_08303 I 0.901
LotgiG215606 Lottia gigantea LotgiG215606 I 0.835
NFIC Loxodonta africana ENSLAFG00000007134 I 0.769
ENSLAFG00000025943 Loxodonta africana ENSLAFG00000025943 I 0.725
LCUP004691 Lucilia cuprina LCUP004691 I 0.824
LLOJ009491 Lutzomyia longipalpis LLOJ009491 I 0.824
ENSP00000383958 Macaca fascicularis ENSP00000383958 I 0.725
NFIA Macaca mulatta ENSMMUG00000013840 I 0.725
NFIC Macaca mulatta ENSMMUG00000003439 I 0.780
NFIX Macaca mulatta ENSMMUG00000019292 I 0.778
ENSMEUG00000010629 Macropus eugenii ENSMEUG00000010629 I 0.780
ENSMEUG00000015063 Macropus eugenii ENSMEUG00000015063 I 0.725
MESCA001033 Megaselia scalaris MESCA001033 I 0.824
ENSMGAG00000011639 Meleagris gallopavo ENSMGAG00000011639 I 0.725
ENSMGAG00000002720 Meleagris gallopavo ENSMGAG00000002720 I 0.736
MhA1_Contig410.frz3.gene15 Meloidogyne hapla MhA1_Contig410.frz3.gene15 I 0.828
ENSMICG00000005075 Microcebus murinus ENSMICG00000005075 I 0.725
NFIB Microcebus murinus ENSMICG00000005833 I 0.718
NFIA Monodelphis domestica ENSMODG00000002475 I 0.725
NFIC Monodelphis domestica ENSMODG00000006935 I 0.780
MDOA004700 Musca domestica MDOA004700 I 0.824
ENSMPUG00000007524 Mustela putorius furo ENSMPUG00000007524 I 0.725
ENSMPUG00000003850 Mustela putorius furo ENSMPUG00000003850 I 0.769
Nfia Mus musculus ENSMUSG00000028565 D 0.725
Nfic Mus musculus ENSMUSG00000055053 D 0.780
Myotis_brandtii_Nfia_10021409 Myotis brandtii Myotis_brandtii_Nfia_10021409 I 0.725
Myotis_brandtii_NFIC_10016328 Myotis brandtii Myotis_brandtii_NFIC_10016328 I 0.769
ENSMLUG00000024011 Myotis lucifugus ENSMLUG00000024011 I 0.725
NFIC Myotis lucifugus ENSMLUG00000006476 I 0.769
NV15784 Nasonia vitripennis NV15784 I 0.846
NECAME_05767 Necator americanus NECAME_05767 N 0.780
NBR_0002112301 Nippostrongylus brasiliensis NBR_0002112301 N 0.714
Ocbimv22006045m.g Octopus bimaculoides Ocbimv22006045m.g I 0.789
SNAPOd2T00003168001 Oikopleura dioica SNAPOd2T00003168001 I 0.747
OFLC_0001047301 Onchocerca flexuosa OFLC_0001047301 I 0.901
nOo.2.0.1.g12948 Onchocerca ochengi nOo.2.0.1.g12948 I 0.901
WBGene00247194 Onchocerca volvulus WBGene00247194 I 0.901
ENSONIG00000004623 Oreochromis niloticus ENSONIG00000004623 I 0.714
ENSONIG00000007717 Oreochromis niloticus ENSONIG00000007717 I 0.736
ENSONIG00000013455 Oreochromis niloticus ENSONIG00000013455 I 0.725
ENSOANG00000000670 Ornithorhynchus anatinus ENSOANG00000000670 I 0.714
ENSOANG00000012488 Ornithorhynchus anatinus ENSOANG00000012488 I 0.725
NFIA Oryctolagus cuniculus ENSOCUG00000005893 I 0.725
nfic Oryzias latipes ENSORLG00000002516 I 0.747
nfia Oryzias latipes ENSORLG00000003529 I 0.725
NFIB Oryzias latipes ENSORLG00000005185 I 0.725
NFIC Otolemur garnettii ENSOGAG00000026321 I 0.769
ENSOARG00000008860 Ovis aries ENSOARG00000008860 I 0.725
ENSOARG00000012667 Ovis aries ENSOARG00000012667 I 0.736
NFIA Pan troglodytes ENSPTRG00000000802 I 0.725
NFIC Pan troglodytes ENSPTRG00000010261 I 0.780
ENSPANG00000004923 Papio anubis ENSPANG00000004923 I 0.780
PHUM301410 Pediculus humanus PHUM301410 I 0.835
ENSPSIG00000005327 Pelodiscus sinensis ENSPSIG00000005327 I 0.725
ENSPMAG00000009308 Petromyzon marinus ENSPMAG00000009308 I 0.714
ENSPFOG00000008414 Poecilia formosa ENSPFOG00000008414 I 0.714
ENSPFOG00000000065 Poecilia formosa ENSPFOG00000000065 I 0.725
ENSPFOG00000000946 Poecilia formosa ENSPFOG00000000946 I 0.736
Pvit_08116 Pogona vitticeps Pvit_08116 I 0.747
ENSPPYG00000009371 Pongo abelii ENSPPYG00000009371 I 0.780
ENSPPYG00000001290 Pongo abelii ENSPPYG00000001290 I 0.725
scaffold324-EXSNAP2012.31 Pristionchus exspectatus scaffold324-EXSNAP2012.31 I 0.758
PPA18485 Pristionchus pacificus PPA18485 I 0.758
NFIC Procavia capensis ENSPCAG00000002205 I 0.769
NFIA Procavia capensis ENSPCAG00000012769 I 0.711
NFIC Pteropus vampyrus ENSPVAG00000004084 I 0.725
NFIA Pteropus vampyrus ENSPVAG00000005805 I 0.725
Nfic Rattus norvegicus ENSRNOG00000004505 I 0.780
Nfia Rattus norvegicus ENSRNOG00000006966 D 0.725
RPRC005635 Rhodnius prolixus RPRC005635 I 0.798
nRc.2.0.1.g39853 Romanomermis culicivorax nRc.2.0.1.g39853 I 0.857
Sakowv30035029m.g Saccoglossus kowalevskii Sakowv30035029m.g I 0.758
ENSSHAG00000009432 Sarcophilus harrisii ENSSHAG00000009432 I 0.725
ENSSHAG00000008822 Sarcophilus harrisii ENSSHAG00000008822 I 0.780
SINV21439 Solenopsis invicta SINV21439 I 0.846
NFIA Sorex araneus ENSSARG00000004476 I 0.725
L596_g9152 Steinernema carpocapsae L596_g9152 I 0.967
L889_g1991 Steinernema feltiae L889_g1991 I 0.967
L893_g18810 Steinernema glaseri L893_g18810 I 0.945
L898_g32383 Steinernema monticolum L898_g32383 I 0.956
SMAR010352 Strigamia maritima SMAR010352 I 0.857
SPU_023339 Strongylocentrotus purpuratus SPU_023339 I 0.769
SVUK_0000435801 Strongylus vulgaris SVUK_0000435801 I 0.936
SMUV_0000807101 Syphacia muris SMUV_0000807101 I 0.890
NFIC Taeniopygia guttata ENSTGUG00000000182 I 0.747
NFIA Taeniopygia guttata ENSTGUG00000009745 I 0.725
NFIB Takifugu rubripes ENSTRUG00000001510 I 0.703
NFIX Takifugu rubripes ENSTRUG00000005030 I 0.703
nfic Takifugu rubripes ENSTRUG00000005745 I 0.758
ENSTSYG00000014719 Tarsius syrichta ENSTSYG00000014719 I 0.714
tetur26g01860 Tetranychus urticae tetur26g01860 I 0.813
NFIB Tetraodon nigroviridis ENSTNIG00000007189 I 0.703
ENSTNIG00000003187 Tetraodon nigroviridis ENSTNIG00000003187 I 0.703
ENSTNIG00000003955 Tetraodon nigroviridis ENSTNIG00000003955 I 0.703
TCNE_0001032701 Toxocara canis TCNE_0001032701 I 0.912
TC001775 Tribolium castaneum TC001775 I 0.868
D917_08921 Trichinella nativa D917_08921 I 0.802
D917_08922 Trichinella nativa D917_08922 I 0.802
TMUE_s0020006100 Trichuris muris TMUE_s0020006100 I 0.846
D918_01205 Trichuris suis D918_01205 I 0.846
TTRE_0000653901 Trichuris trichiura TTRE_0000653901 I 0.846
NFIA Tupaia belangeri ENSTBEG00000013441 I 0.711
NFIA Tursiops truncatus ENSTTRG00000011222 I 0.725
NFIC Tursiops truncatus ENSTTRG00000009660 I 0.769
NFIA Vicugna pacos ENSVPAG00000004054 I 0.725
WUBG_02198 Wuchereria bancrofti WUBG_02198 I 0.901
AAC25161 Xenopus laevis AAC25161 I 0.750
AAC25159 Xenopus laevis AAC25159 I 0.765
AAB38017 Xenopus laevis AAB38017 I 0.769
AAI70116 Xenopus laevis AAI70116 I 0.758
nfic Xenopus tropicalis XB-GENE-484367 I 0.780
nfia Xenopus tropicalis XB-GENE-1010393 I 0.725
ENSXMAG00000008538 Xiphophorus maculatus ENSXMAG00000008538 I 0.725
L798_07165 Zootermopsis nevadensis L798_07165 I 0.846