CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g15056
(
Steinernema glaseri
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
L893_g15056
T325768_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.832
0.832
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.713
0.713
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.713
0.713
Smad4
M05889_2.00
Mus musculus
KCYAGACR
YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
0.703
0.703
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
0.703
0.703
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
0.703
0.703
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS
SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
0.703
0.703
SMAD4
M11275_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
0.703
0.703
SMAD4
M11276_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
0.703
0.703
SMAD4
M11277_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
0.703
0.703
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g15056.t1
SMAD
186
286
VKKAIESLVKKLKDKRTELDSLITAVTSAGKHPTTCVTIQRSLDGRLQVAGRKGVPHVVYARIWRWPNVNKNELKKLPMCQITNDNQDLICINPYHYERVV
Links
Other
SMAD
family TFs
Other
Steinernema glaseri
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g22387
Steinernema feltiae
L889_g22387
I
0.970
L892_g4495
Steinernema scapterisci
L892_g4495
I
0.911
L596_g26024
Steinernema carpocapsae
L596_g26024
I
0.901
nLs.2.1.2.g01829
Litomosoides sigmodontis
nLs.2.1.2.g01829
I
0.891
L898_g29067
Steinernema monticolum
L898_g29067
I
0.889
ANCDUO_13021
Ancylostoma duodenale
ANCDUO_13021
I
0.871
nOo.2.0.1.g06266
Onchocerca ochengi
nOo.2.0.1.g06266
I
0.871
nDi.2.2.2.g06233
Dirofilaria immitis
nDi.2.2.2.g06233
I
0.871
nAv.1.0.1.g08553
Acanthocheilonema viteae
nAv.1.0.1.g08553
I
0.871
OFLC_0000505301
Onchocerca flexuosa
OFLC_0000505301
I
0.871
WUBG_08631
Wuchereria bancrofti
WUBG_08631
I
0.871
WBGene00245700
Onchocerca volvulus
WBGene00245700
I
0.871
Bm5359
Brugia malayi
Bm5359
I
0.871
BTMF_0000952301
Brugia timori
BTMF_0000952301
I
0.871
CGOC_0000897101
Cylicostephanus goldi
CGOC_0000897101
I
0.871
ASU_10605
Ascaris suum
ASU_10605
I
0.861
ALUE_0001111401
Ascaris lumbricoides
ALUE_0001111401
I
0.861
SSTP_0000769000
Strongyloides stercoralis
SSTP_0000769000
I
0.861
LOAG_05337
Loa loa
LOAG_05337
I
0.861
NBR_0001377901
Nippostrongylus brasiliensis
NBR_0001377901
I
0.861
DICVIV_05422
Dictyocaulus viviparus
DICVIV_05422
I
0.861
HPBE_0002536701
Heligmosomoides bakeri
HPBE_0002536701
I
0.861
PTRK_0001020700
Parastrongyloides trichosuri
PTRK_0001020700
I
0.851
HCOI02014300
Haemonchus contortus
HCOI02014300
I
0.851
HCOI01928500
Haemonchus contortus
HCOI01928500
I
0.851
ASIM_0001219601
Anisakis simplex
ASIM_0001219601
I
0.851
TCLT_0000412001
Thelazia callipaeda
TCLT_0000412001
I
0.851
TELCIR_06960
Teladorsagia circumcincta
TELCIR_06960
I
0.851
CBG09090
Caenorhabditis briggsae
CBG09090
I
0.842
scaffold21-EXSNAP2012.60
Pristionchus exspectatus
scaffold21-EXSNAP2012.60
I
0.842
Ppa-sma-4
Pristionchus pacificus
PPA17857
I
0.842
SVE_0858500
Strongyloides venezuelensis
SVE_0858500
I
0.842
EVEC_0000562301
Enterobius vermicularis
EVEC_0000562301
I
0.842
SPAL_0001099400
Strongyloides papillosus
SPAL_0001099400
I
0.842
RSKR_0000114900
Rhabditophanes kr3021
RSKR_0000114900
I
0.842
CJA09693
Caenorhabditis japonica
CJA09693
I
0.842
CBN31444
Caenorhabditis brenneri
CBN31444
I
0.832
CRE04707
Caenorhabditis remanei
CRE04707
I
0.832
sma-4
Caenorhabditis elegans
WBGene00004858
D
0.832
GPUH_0001294301
Gongylonema pulchrum
GPUH_0001294301
I
0.822
ACAC_0000977101
Angiostrongylus cantonensis
ACAC_0000977101
I
0.821
Bm11291
Brugia malayi
Bm11291
I
0.818
GPLIN_000764400
Globodera pallida
GPLIN_000764400
I
0.782
Minc10272
Meloidogyne incognita
Minc10272
I
0.772
Minc06316
Meloidogyne incognita
Minc06316
I
0.772
BXY_1538500
Bursaphelenchus xylophilus
BXY_1538500
I
0.772
TELCIR_11814
Teladorsagia circumcincta
TELCIR_11814
I
0.770
SMAD4
Homo sapiens
ENSG00000141646
D
0.764
maker-nMf.1.1.scaf05118-snap-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf05118-snap-gene-0.7
I
0.762
ANCDUO_08685
Ancylostoma duodenale
ANCDUO_08685
I
0.755
SMAD4
Pteropus vampyrus
ENSPVAG00000004261
I
0.750
SMAD4
Microcebus murinus
ENSMICG00000017525
I
0.750
ANCCAN_26651
Ancylostoma caninum
ANCCAN_26651
I
0.747
OFLC_0001382401
Onchocerca flexuosa
OFLC_0001382401
I
0.746
HelroG88197
Helobdella robusta
HelroG88197
I
0.745
HCOI00557700
Haemonchus contortus
HCOI00557700
N
0.739
BGLB014287
Biomphalaria glabrata
BGLB014287
I
0.735
nAv.1.0.1.g00430
Acanthocheilonema viteae
nAv.1.0.1.g00430
I
0.735
nLs.2.1.2.g01457
Litomosoides sigmodontis
nLs.2.1.2.g01457
I
0.735
ASIM_0001604001
Anisakis simplex
ASIM_0001604001
I
0.735
EEL_0000707501
Elaeophora elaphi
EEL_0000707501
I
0.735
nDi.2.2.2.g01429
Dirofilaria immitis
nDi.2.2.2.g01429
I
0.735
Hba_14016
Heterorhabditis bacteriophora
Hba_14016
I
0.730
CapteG179368
Capitella teleta
CapteG179368
I
0.725
nOo.2.0.1.g00181
Onchocerca ochengi
nOo.2.0.1.g00181
I
0.725
GPUH_0001329001
Gongylonema pulchrum
GPUH_0001329001
I
0.725
ASU_13433
Ascaris suum
ASU_13433
I
0.725
Ocbimv22032358m.g
Octopus bimaculoides
Ocbimv22032358m.g
I
0.725
WBGene00241622
Onchocerca volvulus
WBGene00241622
I
0.725
D918_00298
Trichuris suis
D918_00298
I
0.720
ACUA025512
Anopheles culicifacies
ACUA025512
I
0.716
BTMF_0000404601
Brugia timori
BTMF_0000404601
I
0.716
ADIR002761
Anopheles dirus
ADIR002761
I
0.716
ACOM037505
Anopheles coluzzii
ACOM037505
I
0.716
AFUN009864
Anopheles funestus
AFUN009864
I
0.716
ACHR000067
Anopheles christyi
ACHR000067
I
0.716
PPAI002168
Phlebotomus papatasi
PPAI002168
I
0.716
AQUA009305
Anopheles quadriannulatus
AQUA009305
I
0.716
ASTEI00079
Anopheles stephensi
ASTEI00079
I
0.716
AMIN000723
Anopheles minimus
AMIN000723
I
0.716
AMEM015931
Anopheles merus
AMEM015931
I
0.716
AFAF011208
Anopheles farauti
AFAF011208
I
0.716
LLOJ008806
Lutzomyia longipalpis
LLOJ008806
I
0.716
AMAM019778
Anopheles maculatus
AMAM019778
I
0.716
AEPI002385
Anopheles epiroticus
AEPI002385
I
0.716
NV12984
Nasonia vitripennis
NV12984
I
0.716
ENSPMAG00000009414
Petromyzon marinus
ENSPMAG00000009414
I
0.716
ENSPMAG00000008404
Petromyzon marinus
ENSPMAG00000008404
I
0.716
GB50071
Apis mellifera
GB50071
I
0.716
HelroG76435
Helobdella robusta
HelroG76435
I
0.716
ISCW018468
Ixodes scapularis
ISCW018468
I
0.716
HMEL002203
Heliconius melpomene
HMEL002203
I
0.716
TCLT_0000917301
Thelazia callipaeda
TCLT_0000917301
I
0.716
DAPPUDRAFT_304115
Daphnia pulex
DAPPUDRAFT_304115
I
0.716
TMUE_s0006012700
Trichuris muris
TMUE_s0006012700
I
0.716
ACYPI000365
Acyrthosiphon pisum
ACYPI000365
I
0.716
AGAP002902
Anopheles gambiae
AGAP002902
I
0.716
BGIBMGA010110
Bombyx mori
BGIBMGA010110
I
0.716
CPIJ002563
Culex quinquefasciatus
CPIJ002563
I
0.716
Bm3575
Brugia malayi
Bm3575
I
0.716
KGM_12572
Danaus plexippus
KGM_12572
I
0.716
L798_13939
Zootermopsis nevadensis
L798_13939
I
0.716
Cflo_07183--XP_392838.3_APIME
Camponotus floridanus
Cflo_07183--XP_392838.3_APIME
I
0.716
YQE_06624
Dendroctonus ponderosae
YQE_06624
I
0.716
Hsal_09633--XP_392838.3_APIME
Harpegnathos saltator
Hsal_09633--XP_392838.3_APIME
I
0.716
CpipJ_CPIJ002563
Culex pipiens
CpipJ_CPIJ002563
I
0.716
AARA004719
Anopheles arabiensis
AARA004719
I
0.716
LDEC015949
Leptinotarsa decemlineata
LDEC015949
I
0.716
TC010848
Tribolium castaneum
TC010848
I
0.716
SMAR013850
Strigamia maritima
SMAR013850
I
0.716
LotgiG131078
Lottia gigantea
LotgiG131078
I
0.716
TTRE_0000855901
Trichuris trichiura
TTRE_0000855901
I
0.716
MCINX014520
Melitaea cinxia
MCINX014520
I
0.716
AAEL013896
Aedes aegypti
AAEL013896
I
0.716
SINV15516
Solenopsis invicta
SINV15516
I
0.716
PHUM002670
Pediculus humanus
PHUM002670
I
0.716
AATE010695
Anopheles atroparvus
AATE010695
I
0.716
HHAL000393-PA
Halyomorpha halys
HHAL000393-PA
I
0.706
SMAD4
Tetraodon nigroviridis
ENSTNIG00000009050
I
0.706
si:dkey-222b8.1
Tetraodon nigroviridis
ENSTNIG00000005007
I
0.706
ENSPFOG00000019807
Poecilia formosa
ENSPFOG00000019807
I
0.706
SMAD4
Takifugu rubripes
ENSTRUG00000014045
I
0.706
ENSXMAG00000005051
Xiphophorus maculatus
ENSXMAG00000005051
I
0.706
GF22974
Drosophila ananassae
FBgn0099968
I
0.706
GA14643
Drosophila pseudoobscura
FBgn0074670
I
0.706
Med
Drosophila melanogaster
FBgn0011655
D
0.706
SMAD4
Oryzias latipes
ENSORLG00000007703
I
0.706
ENSONIG00000014036
Oreochromis niloticus
ENSONIG00000014036
I
0.706
EFV62078
Trichinella spiralis
EFV62078
I
0.706
ADAC007516
Anopheles darlingi
ADAC007516
I
0.706
WUBG_02880
Wuchereria bancrofti
WUBG_02880
I
0.706
si:dkey-239n17.4
Danio rerio
ENSDARG00000070428
I
0.706
ENSGACG00000016858
Gasterosteus aculeatus
ENSGACG00000016858
I
0.706
ENSONIG00000010360
Oreochromis niloticus
ENSONIG00000010360
I
0.706
ENSGMOG00000013964
Gadus morhua
ENSGMOG00000013964
I
0.706
ENSGMOG00000000297
Gadus morhua
ENSGMOG00000000297
I
0.706
GG11819
Drosophila erecta
FBgn0104114
I
0.706
GH18642
Drosophila grimshawi
FBgn0126109
I
0.706
e_gw.452.68.1
Branchiostoma floridae
e_gw.452.68.1
I
0.706
tetur10g00400
Tetranychus urticae
tetur10g00400
I
0.706
SPU_004287
Strongylocentrotus purpuratus
SPU_004287
I
0.706
CLEC002594
Cimex lectularius
CLEC002594
I
0.706
HHAL000394-PA
Halyomorpha halys
HHAL000394-PA
I
0.706
MDOA012885
Musca domestica
MDOA012885
I
0.706
AALB009485
Anopheles albimanus
AALB009485
I
0.706
LCUP007928
Lucilia cuprina
LCUP007928
I
0.706
RPRC010188
Rhodnius prolixus
RPRC010188
I
0.706
NEMVEDRAFT_v1g248037
Nematostella vectensis
NEMVEDRAFT_v1g248037
I
0.706
GM16436
Drosophila sechellia
FBgn0171351
I
0.706
GL23637
Drosophila persimilis
FBgn0161227
I
0.706
GI23400
Drosophila mojavensis
FBgn0146126
I
0.706
GJ23092
Drosophila virilis
FBgn0210194
I
0.706
GK11724
Drosophila willistoni
FBgn0213735
I
0.706
LOAG_08923
Loa loa
LOAG_08923
I
0.706
GE10952
Drosophila yakuba
FBgn0228782
I
0.706
D917_09719
Trichinella nativa
D917_09719
I
0.706