L893_g15056 (Steinernema glaseri)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 L893_g15056 T325768_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sma-4
M02484_2.00 		Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN		 PBM
Weirauch et al.(2014)
pTH8996 		0.832 0.832
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.713 0.713
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.713 0.713
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.703 0.703
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.703 0.703
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.703 0.703
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.703 0.703
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.703 0.703
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.703 0.703
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g15056.t1 SMAD 186 286

Links

Other SMAD family TFs
Other Steinernema glaseri TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L889_g22387 Steinernema feltiae L889_g22387 I 0.970
L892_g4495 Steinernema scapterisci L892_g4495 I 0.911
L596_g26024 Steinernema carpocapsae L596_g26024 I 0.901
nLs.2.1.2.g01829 Litomosoides sigmodontis nLs.2.1.2.g01829 I 0.891
L898_g29067 Steinernema monticolum L898_g29067 I 0.889
ANCDUO_13021 Ancylostoma duodenale ANCDUO_13021 I 0.871
nOo.2.0.1.g06266 Onchocerca ochengi nOo.2.0.1.g06266 I 0.871
nDi.2.2.2.g06233 Dirofilaria immitis nDi.2.2.2.g06233 I 0.871
nAv.1.0.1.g08553 Acanthocheilonema viteae nAv.1.0.1.g08553 I 0.871
OFLC_0000505301 Onchocerca flexuosa OFLC_0000505301 I 0.871
WUBG_08631 Wuchereria bancrofti WUBG_08631 I 0.871
WBGene00245700 Onchocerca volvulus WBGene00245700 I 0.871
Bm5359 Brugia malayi Bm5359 I 0.871
BTMF_0000952301 Brugia timori BTMF_0000952301 I 0.871
CGOC_0000897101 Cylicostephanus goldi CGOC_0000897101 I 0.871
ASU_10605 Ascaris suum ASU_10605 I 0.861
ALUE_0001111401 Ascaris lumbricoides ALUE_0001111401 I 0.861
SSTP_0000769000 Strongyloides stercoralis SSTP_0000769000 I 0.861
LOAG_05337 Loa loa LOAG_05337 I 0.861
NBR_0001377901 Nippostrongylus brasiliensis NBR_0001377901 I 0.861
DICVIV_05422 Dictyocaulus viviparus DICVIV_05422 I 0.861
HPBE_0002536701 Heligmosomoides bakeri HPBE_0002536701 I 0.861
PTRK_0001020700 Parastrongyloides trichosuri PTRK_0001020700 I 0.851
HCOI02014300 Haemonchus contortus HCOI02014300 I 0.851
HCOI01928500 Haemonchus contortus HCOI01928500 I 0.851
ASIM_0001219601 Anisakis simplex ASIM_0001219601 I 0.851
TCLT_0000412001 Thelazia callipaeda TCLT_0000412001 I 0.851
TELCIR_06960 Teladorsagia circumcincta TELCIR_06960 I 0.851
CBG09090 Caenorhabditis briggsae CBG09090 I 0.842
scaffold21-EXSNAP2012.60 Pristionchus exspectatus scaffold21-EXSNAP2012.60 I 0.842
Ppa-sma-4 Pristionchus pacificus PPA17857 I 0.842
SVE_0858500 Strongyloides venezuelensis SVE_0858500 I 0.842
EVEC_0000562301 Enterobius vermicularis EVEC_0000562301 I 0.842
SPAL_0001099400 Strongyloides papillosus SPAL_0001099400 I 0.842
RSKR_0000114900 Rhabditophanes kr3021 RSKR_0000114900 I 0.842
CJA09693 Caenorhabditis japonica CJA09693 I 0.842
CBN31444 Caenorhabditis brenneri CBN31444 I 0.832
CRE04707 Caenorhabditis remanei CRE04707 I 0.832
sma-4 Caenorhabditis elegans WBGene00004858 D 0.832
GPUH_0001294301 Gongylonema pulchrum GPUH_0001294301 I 0.822
ACAC_0000977101 Angiostrongylus cantonensis ACAC_0000977101 I 0.821
Bm11291 Brugia malayi Bm11291 I 0.818
GPLIN_000764400 Globodera pallida GPLIN_000764400 I 0.782
Minc10272 Meloidogyne incognita Minc10272 I 0.772
Minc06316 Meloidogyne incognita Minc06316 I 0.772
BXY_1538500 Bursaphelenchus xylophilus BXY_1538500 I 0.772
TELCIR_11814 Teladorsagia circumcincta TELCIR_11814 I 0.770
SMAD4 Homo sapiens ENSG00000141646 D 0.764
maker-nMf.1.1.scaf05118-snap-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf05118-snap-gene-0.7 I 0.762
ANCDUO_08685 Ancylostoma duodenale ANCDUO_08685 I 0.755
SMAD4 Pteropus vampyrus ENSPVAG00000004261 I 0.750
SMAD4 Microcebus murinus ENSMICG00000017525 I 0.750
ANCCAN_26651 Ancylostoma caninum ANCCAN_26651 I 0.747
OFLC_0001382401 Onchocerca flexuosa OFLC_0001382401 I 0.746
HelroG88197 Helobdella robusta HelroG88197 I 0.745
HCOI00557700 Haemonchus contortus HCOI00557700 N 0.739
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.735
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.735
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.735
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.735
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.735
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.735
Hba_14016 Heterorhabditis bacteriophora Hba_14016 I 0.730
CapteG179368 Capitella teleta CapteG179368 I 0.725
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.725
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.725
ASU_13433 Ascaris suum ASU_13433 I 0.725
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.725
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.725
D918_00298 Trichuris suis D918_00298 I 0.720
ACUA025512 Anopheles culicifacies ACUA025512 I 0.716
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.716
ADIR002761 Anopheles dirus ADIR002761 I 0.716
ACOM037505 Anopheles coluzzii ACOM037505 I 0.716
AFUN009864 Anopheles funestus AFUN009864 I 0.716
ACHR000067 Anopheles christyi ACHR000067 I 0.716
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.716
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.716
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.716
AMIN000723 Anopheles minimus AMIN000723 I 0.716
AMEM015931 Anopheles merus AMEM015931 I 0.716
AFAF011208 Anopheles farauti AFAF011208 I 0.716
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.716
AMAM019778 Anopheles maculatus AMAM019778 I 0.716
AEPI002385 Anopheles epiroticus AEPI002385 I 0.716
NV12984 Nasonia vitripennis NV12984 I 0.716
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.716
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.716
GB50071 Apis mellifera GB50071 I 0.716
HelroG76435 Helobdella robusta HelroG76435 I 0.716
ISCW018468 Ixodes scapularis ISCW018468 I 0.716
HMEL002203 Heliconius melpomene HMEL002203 I 0.716
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.716
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.716
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.716
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.716
AGAP002902 Anopheles gambiae AGAP002902 I 0.716
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.716
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.716
Bm3575 Brugia malayi Bm3575 I 0.716
KGM_12572 Danaus plexippus KGM_12572 I 0.716
L798_13939 Zootermopsis nevadensis L798_13939 I 0.716
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.716
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.716
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.716
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.716
AARA004719 Anopheles arabiensis AARA004719 I 0.716
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.716
TC010848 Tribolium castaneum TC010848 I 0.716
SMAR013850 Strigamia maritima SMAR013850 I 0.716
LotgiG131078 Lottia gigantea LotgiG131078 I 0.716
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.716
MCINX014520 Melitaea cinxia MCINX014520 I 0.716
AAEL013896 Aedes aegypti AAEL013896 I 0.716
SINV15516 Solenopsis invicta SINV15516 I 0.716
PHUM002670 Pediculus humanus PHUM002670 I 0.716
AATE010695 Anopheles atroparvus AATE010695 I 0.716
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.706
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.706
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.706
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.706
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.706
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.706
GF22974 Drosophila ananassae FBgn0099968 I 0.706
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.706
Med Drosophila melanogaster FBgn0011655 D 0.706
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.706
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.706
EFV62078 Trichinella spiralis EFV62078 I 0.706
ADAC007516 Anopheles darlingi ADAC007516 I 0.706
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.706
si:dkey-239n17.4 Danio rerio ENSDARG00000070428 I 0.706
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.706
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.706
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.706
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.706
GG11819 Drosophila erecta FBgn0104114 I 0.706
GH18642 Drosophila grimshawi FBgn0126109 I 0.706
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I 0.706
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.706
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.706
CLEC002594 Cimex lectularius CLEC002594 I 0.706
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.706
MDOA012885 Musca domestica MDOA012885 I 0.706
AALB009485 Anopheles albimanus AALB009485 I 0.706
LCUP007928 Lucilia cuprina LCUP007928 I 0.706
RPRC010188 Rhodnius prolixus RPRC010188 I 0.706
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.706
GM16436 Drosophila sechellia FBgn0171351 I 0.706
GL23637 Drosophila persimilis FBgn0161227 I 0.706
GI23400 Drosophila mojavensis FBgn0146126 I 0.706
GJ23092 Drosophila virilis FBgn0210194 I 0.706
GK11724 Drosophila willistoni FBgn0213735 I 0.706
LOAG_08923 Loa loa LOAG_08923 I 0.706
GE10952 Drosophila yakuba FBgn0228782 I 0.706
D917_09719 Trichinella nativa D917_09719 I 0.706