maker-nMf.1.1.scaf05118-snap-gene-0.7 (Meloidogyne floridensis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 maker-nMf.1.1.scaf05118-snap-gene-0.7 T325802_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN

NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.782 0.782
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf05118-snap-gene-0.7-mRNA-1 SMAD 46 160

Links

Other SMAD family TFs
Other Meloidogyne floridensis TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action