maker-nMf.1.1.scaf05118-snap-gene-0.7 (Meloidogyne floridensis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 maker-nMf.1.1.scaf05118-snap-gene-0.7 T325802_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN

NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.782 0.782
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf05118-snap-gene-0.7-mRNA-1 SMAD 46 160

Links

Other SMAD family TFs
Other Meloidogyne floridensis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00001p00009420 Amborella trichopoda AMTR_s00001p00009420 I 0.000
MLOC_9982 Hordeum vulgare MLOC_9982 I 0.000
LPERR04G13900 Leersia perrieri LPERR04G13900 N 0.000
OBART04G17320 Oryza barthii OBART04G17320 I 0.000
ORGLA04G0144400 Oryza glaberrima ORGLA04G0144400 I 0.000
BGIOSGA016686 Oryza indica BGIOSGA016686 I 0.000
OLONG_009319 Oryza longistaminata OLONG_009319 I 0.000
OMERI04G14630 Oryza meridionalis OMERI04G14630 I 0.000
ONIVA04G15630 Oryza nivara ONIVA04G15630 I 0.000
ORUFI04G18750 Oryza rufipogon ORUFI04G18750 I 0.000
OS04G0495800 Oryza sativa OS04G0495800 I 0.000
Pavir.J12413 Panicum virgatum Pavir.J12413 I 0.000