RSKR_0000114900 (Rhabditophanes kr3021)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 RSKR_0000114900 T325880_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sma-4
M02484_2.00 		Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN		 PBM
Weirauch et al.(2014)
pTH8996 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000114900.1 SMAD 137 237

Links

Other SMAD family TFs
Other Rhabditophanes kr3021 TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava11157.m1 Manihot esculenta cassava11157.m1 N 0.000
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N 0.000
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N 0.000
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N 0.000
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N 0.000
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.000
MDP0000216918 Malus domestica MDP0000216918 N 0.000
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N 0.000
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N 0.000
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N 0.000
SapurV1A.0610s0050 Salix purpurea SapurV1A.0610s0050 N 0.000
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N 0.000
TCM_011327 Theobroma cacao TCM_011327 N 0.000
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N 0.000