CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold230-EXSNAP2012.18
(
Pristionchus exspectatus
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
scaffold230-EXSNAP2012.18
T325889_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold230-EXSNAP2012.18
SMAD
133
223
SSKALESLHKKIKDKPKELETFIRCVETKGEEVGGCVTVTRTLDGRLQVAGAKGFPHVIYNKIFRFQQIHKNELRSIPSCRYGFENKSEDE
scaffold230-EXSNAP2012.18
SMAD
247
308
RRPAYRFCRVHYYTEGLLHKIKKKTENEEELMNNSLTISLQNEDLLSDAQVCVNPYHYERPV
scaffold230-EXSNAP2012.18
SMAD
862
952
SSKALESLHKKIKDKPKEMETFIRCVETKGEEVGGCVTVTRTLDGRLQVAGAKGFPHVIYNKIFRFQQIHKNELRSIPSCRYGFENKSEDE
scaffold230-EXSNAP2012.18
SMAD
985
1008
LSPNEDLLSDAQVCVNPYHYERPV
Links
Other
SMAD
family TFs
Other
Pristionchus exspectatus
TFs
0 Related TFs
">No related TF found