TMUE_s0005013500 (Trichuris muris)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 TMUE_s0005013500 T325967_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN

NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.743 0.743
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA

TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.743 0.743
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.743 0.743
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB

VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.743 0.743
Smad3
M09637_2.00
Mus musculus
BYAGMCWN

NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.743 0.743
SMAD3
M11283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.743 0.743
SMAD3
M11284_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.743 0.743
SMAD3
M11285_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.743 0.743
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0005013500 SMAD 86 186

Links

Other SMAD family TFs
Other Trichuris muris TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAB39329 Xenopus laevis AAB39329 I 0.743
Aan_R002236 Calypte anna Aan_R002236 I 0.743
Aan_R005610 Calypte anna Aan_R005610 I 0.733
ACEP23524 Atta cephalotes ACEP23524 I 0.763
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.733
ALUE_0000768501 Ascaris lumbricoides ALUE_0000768501 N 0.703
ASU_10357 Ascaris suum ASU_10357 N 0.703
Bm3140 Brugia malayi Bm3140 N 0.752
Brh_R001114 Buceros rhinoceros Brh_R001114 I 0.789
BTMF_0000153801 Brugia timori BTMF_0000153801 N 0.752
CapteG167863 Capitella teleta CapteG167863 I 0.733
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.743
D917_04509 Trichinella nativa D917_04509 I 0.871
D918_09504 Trichuris suis D918_09504 I 0.970
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I 0.733
EEL_0000740001 Elaeophora elaphi EEL_0000740001 N 0.743
EFV60166 Trichinella spiralis EFV60166 I 0.871
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.743
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.762
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.719
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I 0.763
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I 0.743
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.743
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.743
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I 0.772
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.733
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 0.743
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I 0.789
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.752
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I 0.762
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.743
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I 0.743
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.762
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.743
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.743
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.772
ENSP00000332973 Macaca fascicularis ENSP00000332973 I 0.723
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I 0.743
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.743
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I 0.752
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.703
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.752
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I 0.752
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I 0.743
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I 0.730
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I 0.743
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I 0.743
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I 0.743
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I 0.703
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I 0.762
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.743
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I 0.752
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.713
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I 0.713
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I 0.713
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.743
Gfo_R012055 Geospiza fortis Gfo_R012055 I 0.743
ISCW001846 Ixodes scapularis ISCW001846 I 0.752
L798_14024 Zootermopsis nevadensis L798_14024 I 0.752
LOAG_07479 Loa loa LOAG_07479 N 0.752
LotgiG189014 Lottia gigantea LotgiG189014 I 0.723
ML011743a Mnemiopsis leidyi ML011743a I 0.710
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I 0.743
nAv.1.0.1.g10386 Acanthocheilonema viteae nAv.1.0.1.g10386 N 0.743
nDi.2.2.2.g03838 Dirofilaria immitis nDi.2.2.2.g03838 N 0.743
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.743
nLs.2.1.2.g07765 Litomosoides sigmodontis nLs.2.1.2.g07765 N 0.743
nOo.2.0.1.g09375 Onchocerca ochengi nOo.2.0.1.g09375 N 0.752
nRc.2.0.1.g17233 Romanomermis culicivorax nRc.2.0.1.g17233 N 0.703
OFLC_0000751101 Onchocerca flexuosa OFLC_0000751101 N 0.752
PPAI005080 Phlebotomus papatasi PPAI005080 I 0.744
SMAD2 Sorex araneus ENSSARG00000003487 I 0.743
smad2.S Xenopus laevis XB-GENE-864923 I 0.743
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.743
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I 0.743
SMAD3 Otolemur garnettii ENSOGAG00000014217 I 0.743
Smad3 Mus musculus ENSMUSG00000032402 D 0.743
SMAD3 Echinops telfairi ENSETEG00000003356 I 0.743
smad3 Xenopus tropicalis XB-GENE-481992 I 0.733
SMAD3 Homo sapiens ENSG00000166949 D 0.743
Smad3 Rattus norvegicus ENSRNOG00000008620 I 0.743
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.743
SMAD3 Microcebus murinus ENSMICG00000006119 I 0.743
SMAD3 Ochotona princeps ENSOPRG00000014996 I 0.743
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.743
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.733
SMAD3 Pan troglodytes ENSPTRG00000007199 I 0.743
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I 0.743
SMAD3 Canis familiaris ENSCAFG00000017388 I 0.743
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I 0.745
SMAD3 Callithrix jacchus ENSCJAG00000002088 I 0.743
smad3.L Xenopus laevis XB-GENE-864816 I 0.743
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.752
smad3a Danio rerio ENSDARG00000036096 I 0.762
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.752
smad3a Oryzias latipes ENSORLG00000002207 I 0.752
smad3b Danio rerio ENSDARG00000010207 I 0.743
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.772
smad3b Oryzias latipes ENSORLG00000006803 I 0.743
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I 0.743
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.752
SMAR008230 Strigamia maritima SMAR008230 I 0.743
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I 0.743
Tal_R011237 Tyto alba Tal_R011237 I 0.763
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I 0.970
WBGene00238556 Onchocerca volvulus WBGene00238556 N 0.752
XP_002160208.1 Hydra magnipapillata XP_002160208.1 I 0.703