AMAG_02260 (Allomyces macrogynus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 AMAG_02260 T325988_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AMAG_02260T0 Sox 31 99

Links

Other Sox family TFs
Other Allomyces macrogynus TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29701.m000600 Ricinus communis 29701.m000600 I 0.440
30131.m007272 Ricinus communis 30131.m007272 I 0.530
AAEL011425 Aedes aegypti AAEL011425 I 0.489
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.419
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.425
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.440
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.741
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N 0.435
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I 0.491
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.419
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.416
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.419
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.445
ASU_05994 Ascaris suum ASU_05994 N 0.455
ASU_09087 Ascaris suum ASU_09087 N 0.440
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.447
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.455
BGIOSGA019295 Oryza indica BGIOSGA019295 N 0.415
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.429
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.429
Bm8632 Brugia malayi Bm8632 N 0.488
Bo2g160920 Brassica oleracea Bo2g160920 I 0.495
Bo9g014140 Brassica oleracea Bo9g014140 I 0.495
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N 0.495
Bra026498 Brassica rapa Bra026498 I 0.495
Bra029371 Brassica rapa Bra029371 I 0.495
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.427
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.415
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.464
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.452
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.495
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.495
cassava1392.valid.m1 Manihot esculenta cassava1392.valid.m1 I 0.455
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.449
Ca_19340 Cicer arietinum Ca_19340 I 0.415
CBG04066 Caenorhabditis briggsae CBG04066 N 0.421
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.426
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.458
cgd2_2120 Cryptosporidium parvum cgd2_2120 N 0.477
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.447
Chro.20230 Cryptosporidium hominis Chro.20230 N 0.477
Ciclev10012868m.g Citrus clementina Ciclev10012868m.g I 0.447
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.430
CJA04355 Caenorhabditis japonica CJA04355 N 0.453
Cla009222 Citrullus lanatus Cla009222 I 0.501
CMU_036990 Cryptosporidium muris CMU_036990 N 0.465
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.422
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.422
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.422
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.422
CRE03995 Caenorhabditis remanei CRE03995 N 0.428
CRE11852 Caenorhabditis remanei CRE11852 N 0.448
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.501
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.425
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.457
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.455
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.462
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.452
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.429
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.417
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.433
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I 0.486
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I 0.425
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.469
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N 0.420
e_gw1.6.1001.1 Ostreococcus RCC809 e_gw1.6.1001.1 N 0.433
F775_27510 Aegilops tauschii F775_27510 I 0.427
F775_28104 Aegilops tauschii F775_28104 N 0.432
F775_29723 Aegilops tauschii F775_29723 I 0.415
Ssrp Drosophila melanogaster FBgn0010278 N 0.433
GF12460 Drosophila ananassae FBgn0089497 N 0.433
GG19998 Drosophila erecta FBgn0112197 N 0.433
GH21151 Drosophila grimshawi FBgn0128613 N 0.439
GI18750 Drosophila mojavensis FBgn0141489 N 0.466
GD25013 Drosophila simulans FBgn0196325 N 0.433
GJ21774 Drosophila virilis FBgn0208892 N 0.433
GK22092 Drosophila willistoni FBgn0224077 N 0.429
GE11532 Drosophila yakuba FBgn0229332 N 0.433
fgenesh1_pg.4_#_114 Coccomyxa subellipsoidea C169 fgenesh1_pg.4_#_114 N 0.452
fgeneshCV_pg.C_scaffold_4000123 Chlorella vulgaris fgeneshCV_pg.C_scaffold_4000123 N 0.452
GB47837 Apis mellifera GB47837 N 0.426
GB54571 Apis mellifera GB54571 N 0.458
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.439
GLYMA10G43440 Glycine max GLYMA10G43440 I 0.453
GLYMA20G23370 Glycine max GLYMA20G23370 I 0.453
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.456
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.455
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.427
GSMUA_Achr10G07270_001 Musa acuminata GSMUA_Achr10G07270_001 I 0.433
GSMUA_Achr11G07320_001 Musa acuminata GSMUA_Achr11G07320_001 I 0.443
GSMUA_Achr2G03630_001 Musa acuminata GSMUA_Achr2G03630_001 I 0.433
GSMUA_Achr9G21200_001 Musa acuminata GSMUA_Achr9G21200_001 I 0.433
GSMUA_AchrUn_randomG22010_001 Musa acuminata GSMUA_AchrUn_randomG22010_001 I 0.443
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I 0.476
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I 0.476
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.419
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.433
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.433
HMEL015307 Heliconius melpomene HMEL015307 N 0.447
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.419
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.458
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.426
KGM_13851 Danaus plexippus KGM_13851 N 0.428
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.475
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.457
L798_13679 Zootermopsis nevadensis L798_13679 N 0.458
L889_g16198 Steinernema feltiae L889_g16198 N 0.450
L889_g9094 Steinernema feltiae L889_g9094 N 0.455
L892_g19058 Steinernema scapterisci L892_g19058 N 0.457
L892_g23618 Steinernema scapterisci L892_g23618 N 0.477
L893_g23503 Steinernema glaseri L893_g23503 N 0.450
L893_g29974 Steinernema glaseri L893_g29974 N 0.457
L898_g4830 Steinernema monticolum L898_g4830 N 0.457
L898_g7743 Steinernema monticolum L898_g7743 N 0.450
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.446
LOAG_08062 Loa loa LOAG_08062 N 0.488
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.455
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.415
LPERR06G23570 Leersia perrieri LPERR06G23570 I 0.427
Lus10018073.g Linum usitatissimum Lus10018073.g N 0.422
Lus10028298.g Linum usitatissimum Lus10028298.g I 0.418
Lus10035511.g Linum usitatissimum Lus10035511.g I 0.449
Lus10040192.g Linum usitatissimum Lus10040192.g I 0.418
Lus10042065.g Linum usitatissimum Lus10042065.g N 0.422
M7I_1578 Glarea lozoyensis M7I_1578 I 0.422
MBM_02410 Marssonina brunnea MBM_02410 I 0.422
MDOA007633 Musca domestica MDOA007633 N 0.433
MDP0000205665 Malus domestica MDP0000205665 I 0.472
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.415
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.450
MLOC_78556 Hordeum vulgare MLOC_78556 I 0.427
MTR_1g115220 Medicago truncatula MTR_1g115220 I 0.449
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.418
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.488
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.419
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.488
NECAME_16525 Necator americanus NECAME_16525 N 0.416
NECAME_17555 Necator americanus NECAME_17555 N 0.433
NECAME_17981 Necator americanus NECAME_17981 N 0.433
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.488
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.488
OB01G15440 Oryza brachyantha OB01G15440 N 0.455
OB05G15230 Oryza brachyantha OB05G15230 N 0.415
OB06G35870 Oryza brachyantha OB06G35870 I 0.427
OBART01G05540 Oryza barthii OBART01G05540 N 0.455
OBART05G05520 Oryza barthii OBART05G05520 N 0.415
OBART06G28090 Oryza barthii OBART06G28090 I 0.427
OBART08G00070 Oryza barthii OBART08G00070 I 0.429
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.419
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.455
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.415
OGLUM06G29480 Oryza glumaepatula OGLUM06G29480 I 0.427
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.429
OLONG_007465 Oryza longistaminata OLONG_007465 I 0.427
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.415
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.429
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.455
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.455
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.415
OMERI06G28030 Oryza meridionalis OMERI06G28030 I 0.427
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.455
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.415
ONIVA06G31070 Oryza nivara ONIVA06G31070 I 0.427
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.429
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.455
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.455
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.415
OPUNC06G25640 Oryza punctata OPUNC06G25640 I 0.427
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.429
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.430
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.447
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.455
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.415
ORGLA06G0238300 Oryza glaberrima ORGLA06G0238300 I 0.427
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.455
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.415
ORUFI06G30030 Oryza rufipogon ORUFI06G30030 I 0.427
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.429
SSRP1-A Oryza sativa OS01G0184900 N 0.455
SSRP1-B Oryza sativa OS05G0182600 N 0.415
OS06G0728000 Oryza sativa OS06G0728000 I 0.427
OS08G0101100 Oryza sativa OS08G0101100 I 0.429
OSTLU_15773 Ostreococcus lucimarinus OSTLU_15773 N 0.439
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.418
Pavir.Db00040 Panicum virgatum Pavir.Db00040 I 0.427
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.455
Pavir.J04920 Panicum virgatum Pavir.J04920 I 0.427
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.455
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.472
Pm006054 Prunus mume Pm006054 I 0.472
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.428
PPA14042 Pristionchus pacificus PPA14042 N 0.438
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.446
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.416
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.472
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.439
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.465
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.455
Sb10g030910 Sorghum bicolor Sb10g030910 I 0.427
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.422
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.446
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.446
SELMODRAFT_175895 Selaginella moellendorffii SELMODRAFT_175895 I 0.423
SELMODRAFT_38818 Selaginella moellendorffii SELMODRAFT_38818 I 0.423
Si000646m.g Setaria italica Si000646m.g N 0.455
Si007288m.g Setaria italica Si007288m.g I 0.427
Si014434m.g Setaria italica Si014434m.g N 0.418
SINV22588 Solenopsis invicta SINV22588 N 0.426
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.440
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.451
SNAPOd2T00016002001 Oikopleura dioica SNAPOd2T00016002001 N 0.430
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.422
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.434
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.422
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.434
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.434
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.424
TC012866 Tribolium castaneum TC012866 N 0.439
TCM_007659 Theobroma cacao TCM_007659 I 0.472
TCM_042534 Theobroma cacao TCM_042534 I 0.441
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.434
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.455
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.419
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.487
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N 0.470
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.432
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.415
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.415
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.415
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N 0.432
TRIUR3_13577 Triticum urartu TRIUR3_13577 I 0.427
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.432
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.493
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.445
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.488
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.476