CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMSG_09450
(
Thecamonas trahens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AMSG_09450
T326013_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMSG_09450T0
Sox
504
551
SARAANPFADFVKANYAQVKQSNPDASHGELMSLLSAKYKAAKEASRS
Links
Other
Sox
family TFs
Other
Thecamonas trahens
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPOG_02196
Schizosaccharomyces cryophilus
SPOG_02196
N
0.540
PTSG_02585
Salpingoeca rosetta
PTSG_02585
N
0.535
CAOG_02676
Capsaspora owczarzaki
CAOG_02676
N
0.528
SOCG_00309
Schizosaccharomyces octosporus
SOCG_00309
N
0.519
XP_002163918.1
Hydra magnipapillata
XP_002163918.1
I
0.511
CapteG178344
Capitella teleta
CapteG178344
N
0.507
SJAG_02223
Schizosaccharomyces japonicus
SJAG_02223
N
0.499
LotgiG105193
Lottia gigantea
LotgiG105193
N
0.492
EMIHUDRAFT_117867
Emiliania huxleyi
EMIHUDRAFT_117867
I
0.492
TriadG56122
Trichoplax adhaerens
TriadG56122
N
0.486
DAPPUDRAFT_306626
Daphnia pulex
DAPPUDRAFT_306626
N
0.477
fgenesh1_pm.9__12
Bigelowiella natans
fgenesh1_pm.9__12
N
0.462
V565_033960
Rhizoctonia solani
V565_033960
N
0.446
SPBC19G7.04
Schizosaccharomyces pombe
SPBC19G7.04
N
0.438
Moror_16065
Moniliophthora roreri
Moror_16065
I
0.437
ENSPMAG00000002918
Petromyzon marinus
ENSPMAG00000002918
N
0.434
fgenesh2_pg.scaffold_5000103
Monosiga brevicollis
fgenesh2_pg.scaffold_5000103
N
0.433
L892_g25427
Steinernema scapterisci
L892_g25427
N
0.431
CGI_10027770
Crassostrea gigas
CGI_10027770
N
0.428
ASIM_0000454201
Anisakis simplex
ASIM_0000454201
N
0.421
GSTUM_00007488001
Tuber melanosporum
GSTUM_00007488001
N
0.421
GLOINDRAFT_6870
Rhizophagus irregularis
GLOINDRAFT_6870
N
0.418