CpipJ_CPIJ020011 (Culex pipiens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 CpipJ_CPIJ020011 T326068_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.418 0.448
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ020011-RA Sox 235 301

Links

Other Sox family TFs
Other Culex pipiens TFs

247 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.741
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.711
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.711
AAEL011425 Aedes aegypti AAEL011425 I 0.670
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.627
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.627
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.624
KGM_13851 Danaus plexippus KGM_13851 N 0.618
MDOA007633 Musca domestica MDOA007633 N 0.611
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.610
HMEL015307 Heliconius melpomene HMEL015307 N 0.610
L798_13679 Zootermopsis nevadensis L798_13679 N 0.610
GF12460 Drosophila ananassae FBgn0089497 N 0.596
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.595
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.595
ADAC005115 Anopheles darlingi ADAC005115 N 0.593
AALB010796 Anopheles albimanus AALB010796 N 0.593
GD25013 Drosophila simulans FBgn0196325 N 0.588
Ssrp Drosophila melanogaster FBgn0010278 N 0.588
GI18750 Drosophila mojavensis FBgn0141489 N 0.585
GG19998 Drosophila erecta FBgn0112197 N 0.583
GH21151 Drosophila grimshawi FBgn0128613 N 0.583
GE11532 Drosophila yakuba FBgn0229332 N 0.583
GJ21774 Drosophila virilis FBgn0208892 N 0.583
GK22092 Drosophila willistoni FBgn0224077 N 0.579
RPRC006380 Rhodnius prolixus RPRC006380 I 0.578
GB54571 Apis mellifera GB54571 N 0.575
TC012866 Tribolium castaneum TC012866 N 0.575
LCUP005047 Lucilia cuprina LCUP005047 N 0.570
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.549
GL11071 Drosophila persimilis FBgn0148681 N 0.549
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.548
ACEP16595 Atta cephalotes ACEP16595 I 0.537
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.537
GL17523 Drosophila persimilis FBgn0155126 I 0.532
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.532
GH20784 Drosophila grimshawi FBgn0128247 I 0.532
CBG04066 Caenorhabditis briggsae CBG04066 N 0.529
CRE03995 Caenorhabditis remanei CRE03995 N 0.529
CLEC003860 Cimex lectularius CLEC003860 I 0.529
HmgZ Drosophila melanogaster FBgn0010228 I 0.528
GG20749 Drosophila erecta FBgn0112936 I 0.528
HmgZ Drosophila yakuba FBgn0068145 I 0.528
AMAM004579 Anopheles maculatus AMAM004579 N 0.528
GK15658 Drosophila willistoni FBgn0217663 I 0.528
GM15692 Drosophila sechellia FBgn0170608 I 0.528
GD25171 Drosophila simulans FBgn0196483 I 0.528
MDOA014797 Musca domestica MDOA014797 I 0.526
ASIS014507 Anopheles sinensis ASIS014507 N 0.524
AATE003884 Anopheles atroparvus AATE003884 N 0.524
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I 0.522
CBN25379 Caenorhabditis brenneri CBN25379 I 0.521
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.513
ACHR003271 Anopheles christyi ACHR003271 I 0.512
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.511
ASTEI02374 Anopheles stephensi ASTEI02374 N 0.508
GJ20604 Drosophila virilis FBgn0207743 I 0.505
GI20867 Drosophila mojavensis FBgn0143601 I 0.505
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.504
GF11622 Drosophila ananassae FBgn0088662 I 0.501
AMIN009362 Anopheles minimus AMIN009362 N 0.501
AFUN009600 Anopheles funestus AFUN009600 N 0.501
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.501
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.499
Minc10016 Meloidogyne incognita Minc10016 N 0.496
Minc01744 Meloidogyne incognita Minc01744 N 0.496
ADIR000496 Anopheles dirus ADIR000496 N 0.494
AFAF013045 Anopheles farauti AFAF013045 N 0.494
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.492
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.490
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.490
MDOA009531 Musca domestica MDOA009531 N 0.489
ADIR000495 Anopheles dirus ADIR000495 N 0.488
AARA003413 Anopheles arabiensis AARA003413 N 0.488
ADAC005122 Anopheles darlingi ADAC005122 N 0.488
AGAP012334 Anopheles gambiae AGAP012334 N 0.488
AALB010797 Anopheles albimanus AALB010797 N 0.488
ACHR003270 Anopheles christyi ACHR003270 N 0.488
ACOM026236 Anopheles coluzzii ACOM026236 N 0.488
AEPI002535 Anopheles epiroticus AEPI002535 N 0.488
AFUN009599 Anopheles funestus AFUN009599 N 0.488
AMEC017787 Anopheles melas AMEC017787 N 0.488
AMAM007083 Anopheles maculatus AMAM007083 N 0.488
AQUA002990 Anopheles quadriannulatus AQUA002990 N 0.488
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.486
PPA02261 Pristionchus pacificus PPA02261 N 0.486
BGIBMGA005289 Bombyx mori BGIBMGA005289 I 0.485
SMAR015352 Strigamia maritima SMAR015352 N 0.482
AAEL002381 Aedes aegypti AAEL002381 N 0.481
AAEL011414 Aedes aegypti AAEL011414 N 0.481
CPIJ002952 Culex quinquefasciatus CPIJ002952 N 0.481
CpipJ_CPIJ002952 Culex pipiens CpipJ_CPIJ002952 N 0.481
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.478
TsM_000111500 Taenia solium TsM_000111500 N 0.477
KGM_13852 Danaus plexippus KGM_13852 I 0.476
MCINX001064 Melitaea cinxia MCINX001064 I 0.472
CapteG172235 Capitella teleta CapteG172235 I 0.471
TCM_007659 Theobroma cacao TCM_007659 I 0.470
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.469
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.468
ML09221a Mnemiopsis leidyi ML09221a N 0.466
HmgD Drosophila yakuba FBgn0068146 N 0.463
HmgD Drosophila melanogaster FBgn0004362 N 0.463
GI18728 Drosophila mojavensis FBgn0141467 N 0.463
GM15859 Drosophila sechellia FBgn0170775 N 0.463
GJ21748 Drosophila virilis FBgn0208866 N 0.463
GD11622 Drosophila simulans FBgn0183362 N 0.463
GH21124 Drosophila grimshawi FBgn0128586 N 0.463
GG22136 Drosophila erecta FBgn0114310 N 0.463
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.462
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.462
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.462
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.462
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.462
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.462
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.462
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.462
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.462
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.462
Bm8632 Brugia malayi Bm8632 N 0.462
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.462
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.462
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.462
LOAG_08062 Loa loa LOAG_08062 N 0.462
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.462
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.462
GM13209 Drosophila sechellia FBgn0168140 N 0.462
Pm006054 Prunus mume Pm006054 I 0.460
MDP0000205665 Malus domestica MDP0000205665 I 0.460
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.460
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.460
L893_g23503 Steinernema glaseri L893_g23503 N 0.459
GF13265 Drosophila ananassae FBgn0090297 N 0.457
NECAME_17555 Necator americanus NECAME_17555 N 0.457
GK15924 Drosophila willistoni FBgn0217926 N 0.457
NECAME_17981 Necator americanus NECAME_17981 N 0.457
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.457
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.457
ENSAMXG00000014826 Astyanax mexicanus ENSAMXG00000014826 N 0.455
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.453
CRE11852 Caenorhabditis remanei CRE11852 N 0.453
CBG09136 Caenorhabditis briggsae CBG09136 N 0.453
L898_g7743 Steinernema monticolum L898_g7743 N 0.453
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.451
L892_g23618 Steinernema scapterisci L892_g23618 N 0.451
ssrp1a Danio rerio ENSDARG00000037397 I 0.451
LCUP016801 Lucilia cuprina LCUP016801 N 0.451
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.448
hmg-3 Caenorhabditis elegans WBGene00001973 N 0.448
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.447
CJA04355 Caenorhabditis japonica CJA04355 N 0.447
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.446
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.446
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.446
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.446
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.446
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.446
L889_g16198 Steinernema feltiae L889_g16198 N 0.445
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I 0.445
RSKR_0000171200 Rhabditophanes kr3021 RSKR_0000171200 N 0.444
RSKR_0000540800 Rhabditophanes kr3021 RSKR_0000540800 N 0.444
AEPI002536 Anopheles epiroticus AEPI002536 N 0.443
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.442
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.442
ASU_05994 Ascaris suum ASU_05994 N 0.442
BGIBMGA007393 Bombyx mori BGIBMGA007393 N 0.441
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.439
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.439
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.439
NECAME_16525 Necator americanus NECAME_16525 N 0.439
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.438
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.438
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.437
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.435
L889_g9094 Steinernema feltiae L889_g9094 N 0.435
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.435
mgf024995m Mimulus guttatus mgf024995m I 0.435
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.435
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.435
L893_g29974 Steinernema glaseri L893_g29974 N 0.435
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.435
L898_g4830 Steinernema monticolum L898_g4830 N 0.435
L892_g19058 Steinernema scapterisci L892_g19058 N 0.435
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.434
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.433
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.433
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.433
Bra029371 Brassica rapa Bra029371 I 0.433
Bra026498 Brassica rapa Bra026498 I 0.433
Bo2g160920 Brassica oleracea Bo2g160920 I 0.433
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.433
Bo9g014140 Brassica oleracea Bo9g014140 I 0.432
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.432
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.431
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.431
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.430
GA30453 Drosophila pseudoobscura FBgn0264590 N 0.430
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.430
Cla009222 Citrullus lanatus Cla009222 I 0.430
OB08G10120 Oryza brachyantha OB08G10120 N 0.430
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.430
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.430
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.430
OBART08G00070 Oryza barthii OBART08G00070 I 0.430
OS08G0101100 Oryza sativa OS08G0101100 I 0.430
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.430
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.430
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.430
GL16947 Drosophila persimilis FBgn0154551 N 0.430
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.430
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.429
ASU_09087 Ascaris suum ASU_09087 N 0.429
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.428
CJA19030 Caenorhabditis japonica CJA19030 N 0.428
AGAP012335 Anopheles gambiae AGAP012335 N 0.428
AARA003414 Anopheles arabiensis AARA003414 N 0.428
AMEC001570 Anopheles melas AMEC001570 N 0.428
AQUA002991 Anopheles quadriannulatus AQUA002991 N 0.428
ACOM026234 Anopheles coluzzii ACOM026234 N 0.428
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.427
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.427
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.427
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.427
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.427
EMIHUDRAFT_452808 Emiliania huxleyi EMIHUDRAFT_452808 N 0.427
SPU_023988 Strongylocentrotus purpuratus SPU_023988 N 0.426
ECPE_0001309901 Echinostoma caproni ECPE_0001309901 N 0.425
EDI_049480 Entamoeba dispar EDI_049480 N 0.424
EVEC_0000195001 Enterobius vermicularis EVEC_0000195001 N 0.424
30131.m007272 Ricinus communis 30131.m007272 I 0.423
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.422
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.422
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.422
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.421
CGI_10024258 Crassostrea gigas CGI_10024258 N 0.421
PPA14042 Pristionchus pacificus PPA14042 N 0.421
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.420
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.420
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.419
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.419
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.419
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.418
NCU02819 Neurospora crassa NCU02819 D 0.418
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.418
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.418
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.417
EHI_045480 Entamoeba histolytica EHI_045480 N 0.415