RO3G_15755 (Rhizopus oryzae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RO3G_15755 T326119_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN

NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.449 0.448
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_15754 Sox 184 250

Links

Other Sox family TFs
Other Rhizopus oryzae TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29742.m001400 Ricinus communis 29742.m001400 I 0.000
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.000
Bo5g002600 Brassica oleracea Bo5g002600 I 0.000
Bo8g117810 Brassica oleracea Bo8g117810 I 0.000
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I 0.000
Bra016136 Brassica rapa Bra016136 I 0.000
Bra032630 Brassica rapa Bra032630 I 0.000
Bra033274 Brassica rapa Bra033274 I 0.000
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.000
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.000
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.000
Ca_01325 Cicer arietinum Ca_01325 I 0.000
Ca_17638 Cicer arietinum Ca_17638 I 0.000
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.000
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.000
Cla012665 Citrullus lanatus Cla012665 I 0.000
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.000
ERF023 Arabidopsis thaliana AT1G01250 D 0.000
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.000
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.000
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.000
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.000
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.000
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.000
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.000
mgf020568m Mimulus guttatus mgf020568m I 0.000
MTR_7g117690 Medicago truncatula MTR_7g117690 I 0.000
MTR_8g027465 Medicago truncatula MTR_8g027465 I 0.000
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.000
PGSC0003DMG400007036 Solanum tuberosum PGSC0003DMG400007036 N 0.000
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.000
PK15554.1 Cannabis sativa PK15554.1 I 0.000
Pm018354 Prunus mume Pm018354 I 0.000
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.000
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.000
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.000
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.000
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.000
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.000
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.000
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.000
TCM_005130 Theobroma cacao TCM_005130 I 0.000
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.000
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.000
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.000