CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACEP16595
(
Atta cephalotes
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ACEP16595
T326289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.419
0.418
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACEP16595-PA
Sox
539
605
PKRPPSAFMLWLSSTRDSIKTDNPGLSITDIAKKGGEMWRELKDKSEWETKAAKAKKDYMTSMKEYQ
Links
Other
Sox
family TFs
Other
Atta cephalotes
TFs
134 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TC012866
Tribolium castaneum
TC012866
N
0.564
LCUP005047
Lucilia cuprina
LCUP005047
N
0.548
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.541
AALB010796
Anopheles albimanus
AALB010796
N
0.539
ADAC005115
Anopheles darlingi
ADAC005115
N
0.539
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.537
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.537
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.537
PPA02261
Pristionchus pacificus
PPA02261
N
0.537
GB54571
Apis mellifera
GB54571
N
0.534
GF11622
Drosophila ananassae
FBgn0088662
I
0.516
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.512
GI20867
Drosophila mojavensis
FBgn0143601
I
0.511
GJ20604
Drosophila virilis
FBgn0207743
I
0.511
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.507
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.507
ENSMMUP00000037751
Macaca fascicularis
ENSMMUP00000037751
N
0.504
GF13265
Drosophila ananassae
FBgn0090297
N
0.503
GK15924
Drosophila willistoni
FBgn0217926
N
0.503
CLEC003860
Cimex lectularius
CLEC003860
I
0.503
GI18728
Drosophila mojavensis
FBgn0141467
N
0.497
GD11622
Drosophila simulans
FBgn0183362
N
0.497
HmgD
Drosophila yakuba
FBgn0068146
N
0.497
GJ21748
Drosophila virilis
FBgn0208866
N
0.497
HmgD
Drosophila melanogaster
FBgn0004362
N
0.497
GH21124
Drosophila grimshawi
FBgn0128586
N
0.497
ASIS014507
Anopheles sinensis
ASIS014507
N
0.497
GM15859
Drosophila sechellia
FBgn0170775
N
0.497
GM13209
Drosophila sechellia
FBgn0168140
N
0.497
GG22136
Drosophila erecta
FBgn0114310
N
0.497
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.494
ENSCJAG00000031139
Callithrix jacchus
ENSCJAG00000031139
I
0.491
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.491
MCINX001064
Melitaea cinxia
MCINX001064
I
0.491
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.491
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.490
GK15658
Drosophila willistoni
FBgn0217663
I
0.489
MDOA009531
Musca domestica
MDOA009531
N
0.489
HmgZ
Drosophila yakuba
FBgn0068145
I
0.489
GG20749
Drosophila erecta
FBgn0112936
I
0.489
GD25171
Drosophila simulans
FBgn0196483
I
0.489
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.489
GM15692
Drosophila sechellia
FBgn0170608
I
0.489
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.488
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.487
LCUP016801
Lucilia cuprina
LCUP016801
N
0.486
KGM_13852
Danaus plexippus
KGM_13852
I
0.486
GL17523
Drosophila persimilis
FBgn0155126
I
0.484
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.484
GH20784
Drosophila grimshawi
FBgn0128247
I
0.484
GL11071
Drosophila persimilis
FBgn0148681
N
0.483
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.483
MDOA007633
Musca domestica
MDOA007633
N
0.482
MDOA014797
Musca domestica
MDOA014797
I
0.478
AAEL011425
Aedes aegypti
AAEL011425
I
0.475
ACHR003271
Anopheles christyi
ACHR003271
I
0.474
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.472
AMEC017787
Anopheles melas
AMEC017787
N
0.471
AMAM007083
Anopheles maculatus
AMAM007083
N
0.471
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.471
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.471
AARA003413
Anopheles arabiensis
AARA003413
N
0.471
AALB010797
Anopheles albimanus
AALB010797
N
0.471
ACHR003270
Anopheles christyi
ACHR003270
N
0.471
ADIR000495
Anopheles dirus
ADIR000495
N
0.471
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.471
AFUN009599
Anopheles funestus
AFUN009599
N
0.471
KGM_13851
Danaus plexippus
KGM_13851
N
0.471
ADAC005122
Anopheles darlingi
ADAC005122
N
0.471
AGAP012334
Anopheles gambiae
AGAP012334
N
0.471
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.470
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.470
AATE003884
Anopheles atroparvus
AATE003884
N
0.470
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.469
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.469
ADIR000496
Anopheles dirus
ADIR000496
N
0.467
AFAF013045
Anopheles farauti
AFAF013045
N
0.467
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.466
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.465
GL16947
Drosophila persimilis
FBgn0154551
N
0.465
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.465
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.465
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.463
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.462
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.462
AAEL011414
Aedes aegypti
AAEL011414
N
0.462
AAEL002381
Aedes aegypti
AAEL002381
N
0.462
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.455
GG19998
Drosophila erecta
FBgn0112197
N
0.455
GE11532
Drosophila yakuba
FBgn0229332
N
0.455
GJ21774
Drosophila virilis
FBgn0208892
N
0.455
HMEL015307
Heliconius melpomene
HMEL015307
N
0.454
GH21151
Drosophila grimshawi
FBgn0128613
N
0.454
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.454
GI18750
Drosophila mojavensis
FBgn0141489
N
0.454
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.452
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.450
GF12460
Drosophila ananassae
FBgn0089497
N
0.450
GD25013
Drosophila simulans
FBgn0196325
N
0.450
GK22092
Drosophila willistoni
FBgn0224077
N
0.450
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.446
CapteG172235
Capitella teleta
CapteG172235
I
0.445
LotgiG207546
Lottia gigantea
LotgiG207546
N
0.445
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.441
XP_002159252.1
Hydra magnipapillata
XP_002159252.1
I
0.439
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.435
ENSOGAG00000034481
Otolemur garnettii
ENSOGAG00000034481
N
0.434
ASTEI02374
Anopheles stephensi
ASTEI02374
N
0.430
mgf024995m
Mimulus guttatus
mgf024995m
I
0.428
NECAME_17555
Necator americanus
NECAME_17555
N
0.427
NECAME_17981
Necator americanus
NECAME_17981
N
0.427
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.426
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.425
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.424
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.423
LOAG_08062
Loa loa
LOAG_08062
N
0.423
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.423
AMIN009362
Anopheles minimus
AMIN009362
N
0.423
AFUN009600
Anopheles funestus
AFUN009600
N
0.423
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.423
Bm8632
Brugia malayi
Bm8632
N
0.423
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.423
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.423
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.419
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.419
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.419
NCU02819
Neurospora crassa
NCU02819
D
0.419
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.418
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.418
CGI_10024258
Crassostrea gigas
CGI_10024258
N
0.417
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.416
Minc01744
Meloidogyne incognita
Minc01744
N
0.415
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.415
Minc10016
Meloidogyne incognita
Minc10016
N
0.415