CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACEP23223
(
Atta cephalotes
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ACEP23223
T326301_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACEP23223-PA
Sox
840
888
PKREPTGFALYVKQNYNSVKKEKSNMKHADVMKFLGQQFSAIKIAKKND
Links
Other
Sox
family TFs
Other
Atta cephalotes
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cflo_06149--XP_001122099.1_APIME
Camponotus floridanus
Cflo_06149--XP_001122099.1_APIME
N
0.695
Hsal_02240--XP_001122099.1_APIME
Harpegnathos saltator
Hsal_02240--XP_001122099.1_APIME
N
0.598
NV14872
Nasonia vitripennis
NV14872
N
0.551
V565_033960
Rhizoctonia solani
V565_033960
N
0.542
CGI_10027770
Crassostrea gigas
CGI_10027770
N
0.505
fgenesh2_pg.scaffold_5000103
Monosiga brevicollis
fgenesh2_pg.scaffold_5000103
N
0.498
DAPPUDRAFT_306626
Daphnia pulex
DAPPUDRAFT_306626
N
0.473
LotgiG105193
Lottia gigantea
LotgiG105193
N
0.471
CAOG_02676
Capsaspora owczarzaki
CAOG_02676
N
0.470
TC012902
Tribolium castaneum
TC012902
N
0.458
LDEC009506
Leptinotarsa decemlineata
LDEC009506
N
0.454
SJAG_02223
Schizosaccharomyces japonicus
SJAG_02223
N
0.445
ENSPMAG00000002918
Petromyzon marinus
ENSPMAG00000002918
N
0.441
SOCG_00309
Schizosaccharomyces octosporus
SOCG_00309
N
0.437
L892_g25427
Steinernema scapterisci
L892_g25427
N
0.428
EMIHUDRAFT_117867
Emiliania huxleyi
EMIHUDRAFT_117867
I
0.425
L804_03818
Cryptococcus gattii
L804_03818
N
0.418
XP_002163918.1
Hydra magnipapillata
XP_002163918.1
I
0.418