AMTR_s00023p00232620 (Amborella trichopoda)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AMTR_s00023p00232620 T326425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERM95717 Sox 67 133

Links

Other Sox family TFs
Other Amborella trichopoda TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.3543s0020 Salix purpurea SapurV1A.3543s0020 N 0.527
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.474
Lus10023090.g Linum usitatissimum Lus10023090.g N 0.462
LDEC007066 Leptinotarsa decemlineata LDEC007066 N 0.439
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.436
Sakowv30022291m.g Saccoglossus kowalevskii Sakowv30022291m.g N 0.436
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.436
PPAI002532 Phlebotomus papatasi PPAI002532 N 0.427
LLOJ004028 Lutzomyia longipalpis LLOJ004028 N 0.427
MDOA008474 Musca domestica MDOA008474 N 0.424
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.424
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.420
L889_g13125 Steinernema feltiae L889_g13125 N 0.419
CJA03316 Caenorhabditis japonica CJA03316 N 0.418
CBN07735 Caenorhabditis brenneri CBN07735 N 0.418
CJA30740 Caenorhabditis japonica CJA30740 N 0.418
CBN31697 Caenorhabditis brenneri CBN31697 N 0.418
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.418
CRE14258 Caenorhabditis remanei CRE14258 N 0.418
CBG11867 Caenorhabditis briggsae CBG11867 N 0.418
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.417
LCUP007789 Lucilia cuprina LCUP007789 N 0.417
GK13168 Drosophila willistoni FBgn0215177 N 0.417
L898_g14011 Steinernema monticolum L898_g14011 N 0.417
HMEL006186 Heliconius melpomene HMEL006186 N 0.415
TC000618 Tribolium castaneum TC000618 N 0.415
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.415