CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMTR_s00093p00057150
(
Amborella trichopoda
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
AMTR_s00093p00057150
T326433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM98786
Sox
146
211
EKKPNPPYILWCKEHWNQIKSENPEAEFKEISNILGAKWKDLSLEEKKPYEEKYKAERELYLKVVG
ERM98786
Sox
262
328
PKQPLSAFFIFSKERRAALPSENKNILEDAKIAGEEWKKMTKEMRAPYEEAAKKEKEKYLKEMDLYK
ERM98786
Sox
389
456
PKKPATSFFLFNKETRKLLLQDRPGINNSTLNALISVKWKELNDEERQIWVNRAAEAMAAYKEHMKSV
Links
Other
Sox
family TFs
Other
Amborella trichopoda
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy