BN946_scf184940.g27 (Trametes cinnabarina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 BN946_scf184940.g27 T326640_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW

WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.436 0.304
ste11
M11343_2.00
Schizosaccharomyces pombe Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.436 0.304
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN

NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.423 0.377
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS

SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.423 0.377
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN

NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.423 0.377
ROX1
M11346_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.423 0.377
ROX1
M11347_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.423 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CDO71880 Sox 133 203

Links

Other Sox family TFs
Other Trametes cinnabarina TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000005830 Ailuropoda melanoleuca ENSAMEG00000005830 I 0.000
ENSAMEG00000008160 Ailuropoda melanoleuca ENSAMEG00000008160 I 0.000
ENSAMEG00000015853 Ailuropoda melanoleuca ENSAMEG00000015853 I 0.000
Alligator_sinensis_CCG015231.1 Alligator sinensis Alligator_sinensis_CCG015231.1 I 0.000
Alligator_sinensis_CCG012713.1 Alligator sinensis Alligator_sinensis_CCG012713.1 I 0.000
ENSAPLG00000009645 Anas platyrhynchos ENSAPLG00000009645 I 0.000
TBX18 Anolis carolinensis ENSACAG00000003859 I 0.000
TBX15 Anolis carolinensis ENSACAG00000008131 I 0.000
Afo_R005490 Aptenodytes forsteri Afo_R005490 I 0.000
ENSAMXG00000005724 Astyanax mexicanus ENSAMXG00000005724 I 0.000
ENSAMXG00000004418 Astyanax mexicanus ENSAMXG00000004418 I 0.000
ENSAMXG00000013612 Astyanax mexicanus ENSAMXG00000013612 I 0.000
ENSP00000358437-D1 Bos grunniens ENSP00000358437-D1 I 0.000
ENSP00000362390-D1 Bos grunniens ENSP00000362390-D1 I 0.000
ENSP00000358677-D1 Bos grunniens ENSP00000358677-D1 I 0.000
TBX22 Bos taurus ENSBTAG00000048060 I 0.000
TBX18 Bos taurus ENSBTAG00000018161 I 0.000
e_gw.418.20.1 Branchiostoma floridae e_gw.418.20.1 I 0.000
estExt_fgenesh2_pg.C_1050030 Branchiostoma floridae estExt_fgenesh2_pg.C_1050030 I 0.000
Brh_R004487 Buceros rhinoceros Brh_R004487 I 0.000
TBX22 Callithrix jacchus ENSCJAG00000009617 I 0.000
TBX18 Callithrix jacchus ENSCJAG00000015218 I 0.000
TBX15 Callithrix jacchus ENSCJAG00000005662 I 0.000
Aan_R004737 Calypte anna Aan_R004737 I 0.000
Aan_R013329 Calypte anna Aan_R013329 I 0.000
Aan_R001146 Calypte anna Aan_R001146 I 0.000
TBX18 Canis familiaris ENSCAFG00000002987 I 0.000
TBX15 Canis familiaris ENSCAFG00000009976 I 0.000
ENSCPOG00000008004 Cavia porcellus ENSCPOG00000008004 I 0.000
TBX15 Cavia porcellus ENSCPOG00000000615 I 0.000
Cmyd_10014386 Chelonia mydas Cmyd_10014386 I 0.000
Cmyd_10007257 Chelonia mydas Cmyd_10007257 I 0.000
Cmyd_10005629 Chelonia mydas Cmyd_10005629 I 0.000
ENSCSAG00000001712 Chlorocebus sabaeus ENSCSAG00000001712 I 0.000
ENSCSAG00000010713 Chlorocebus sabaeus ENSCSAG00000010713 I 0.000
ENSCSAG00000017375 Chlorocebus sabaeus ENSCSAG00000017375 I 0.000
tbx22 Danio rerio ENSDARG00000091748 I 0.000
tbx18 Danio rerio ENSDARG00000036930 I 0.000
tbx15 Danio rerio ENSDARG00000002582 I 0.000
TBX18 Dasypus novemcinctus ENSDNOG00000049259 I 0.000
TBX15 Dasypus novemcinctus ENSDNOG00000003930 I 0.000
TBX18 Echinops telfairi ENSETEG00000006457 I 0.000
TBX22 Echinops telfairi ENSETEG00000006623 I 0.000
TBX15 Equus caballus ENSECAG00000023325 I 0.000
TBX22 Equus caballus ENSECAG00000014426 I 0.000
TBX18 Equus caballus ENSECAG00000005787 I 0.000
TBX15 Erinaceus europaeus ENSEEUG00000003919 I 0.000
TBX18 Erinaceus europaeus ENSEEUG00000013766 I 0.000
TBX18 Felis catus ENSFCAG00000012657 I 0.000
TBX22 Felis catus ENSFCAG00000002301 I 0.000
TBX15 Felis catus ENSFCAG00000023731 I 0.000
ENSFALG00000002783 Ficedula albicollis ENSFALG00000002783 I 0.000
ENSFALG00000005042 Ficedula albicollis ENSFALG00000005042 I 0.000
ENSGMOG00000003658 Gadus morhua ENSGMOG00000003658 I 0.000
TBX22 Gallus gallus ENSGALG00000004093 I 0.000
ENSGALG00000015834 Gallus gallus ENSGALG00000015834 I 0.000
ENSGALG00000014776 Gallus gallus ENSGALG00000014776 I 0.000
tbx18 Gasterosteus aculeatus ENSGACG00000005602 I 0.000
Gfo_R005492 Geospiza fortis Gfo_R005492 I 0.000
TBX15 Gorilla gorilla ENSGGOG00000013468 I 0.000
TBX18 Gorilla gorilla ENSGGOG00000027982 I 0.000
TBX22 Gorilla gorilla ENSGGOG00000008990 I 0.000
TBX22 Homo sapiens ENSG00000122145 D 0.000
TBX15 Homo sapiens ENSG00000092607 D 0.000
TBX18 Homo sapiens ENSG00000112837 D 0.000
ENSSTOG00000013040 Ictidomys tridecemlineatus ENSSTOG00000013040 I 0.000
ENSSTOG00000020544 Ictidomys tridecemlineatus ENSSTOG00000020544 I 0.000
ENSSTOG00000003725 Ictidomys tridecemlineatus ENSSTOG00000003725 I 0.000
ENSLACG00000006381 Latimeria chalumnae ENSLACG00000006381 I 0.000
ENSLACG00000015964 Latimeria chalumnae ENSLACG00000015964 I 0.000
ENSLOCG00000014991 Lepisosteus oculatus ENSLOCG00000014991 I 0.000
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I 0.000
ENSLOCG00000011023 Lepisosteus oculatus ENSLOCG00000011023 I 0.000
TBX15 Loxodonta africana ENSLAFG00000018452 I 0.000
TBX22 Loxodonta africana ENSLAFG00000001881 I 0.000
TBX18 Loxodonta africana ENSLAFG00000015009 I 0.000
ENSP00000358677 Macaca fascicularis ENSP00000358677 I 0.000
ENSP00000362390 Macaca fascicularis ENSP00000362390 I 0.000
ENSP00000358437 Macaca fascicularis ENSP00000358437 I 0.000
TBX15 Macaca mulatta ENSMMUG00000009257 I 0.000
TBX18 Macaca mulatta ENSMMUG00000010599 I 0.000
TBX22 Macaca mulatta ENSMMUG00000009102 I 0.000
TBX18 Meleagris gallopavo ENSMGAG00000013715 I 0.000
TBX15 Meleagris gallopavo ENSMGAG00000014235 I 0.000
TBX22 Meleagris gallopavo ENSMGAG00000001700 I 0.000
TBX22 Microcebus murinus ENSMICG00000009019 I 0.000
TBX22 Monodelphis domestica ENSMODG00000004255 I 0.000
TBX18 Monodelphis domestica ENSMODG00000018361 I 0.000
TBX15 Monodelphis domestica ENSMODG00000005319 I 0.000
ENSMPUG00000012619 Mustela putorius furo ENSMPUG00000012619 I 0.000
ENSMPUG00000001549 Mustela putorius furo ENSMPUG00000001549 I 0.000
ENSMPUG00000005346 Mustela putorius furo ENSMPUG00000005346 I 0.000
Tbx22 Mus musculus ENSMUSG00000031241 I 0.000
Tbx15 Mus musculus ENSMUSG00000027868 I 0.000
Tbx18 Mus musculus ENSMUSG00000032419 I 0.000
Myotis_brandtii_TBX18_10024963 Myotis brandtii Myotis_brandtii_TBX18_10024963 I 0.000
Myotis_brandtii_Tbx15_10011211 Myotis brandtii Myotis_brandtii_Tbx15_10011211 I 0.000
Myotis_brandtii_Tbx22_10010932 Myotis brandtii Myotis_brandtii_Tbx22_10010932 I 0.000
TBX18 Myotis lucifugus ENSMLUG00000011326 I 0.000
TBX15 Myotis lucifugus ENSMLUG00000002958 I 0.000
TBX22 Myotis lucifugus ENSMLUG00000016826 I 0.000
NEMVEDRAFT_v1g88753 Nematostella vectensis NEMVEDRAFT_v1g88753 I 0.000
ENSNLEG00000002116 Nomascus leucogenys ENSNLEG00000002116 I 0.000
ENSNLEG00000012797 Nomascus leucogenys ENSNLEG00000012797 I 0.000
TBX15 Ochotona princeps ENSOPRG00000004847 I 0.000
Ogr10944 Ophisaurus gracilis Ogr10944 I 0.000
Ogr03354 Ophisaurus gracilis Ogr03354 I 0.000
Ogr00863 Ophisaurus gracilis Ogr00863 I 0.000
ENSONIG00000017642 Oreochromis niloticus ENSONIG00000017642 I 0.000
ENSONIG00000001051 Oreochromis niloticus ENSONIG00000001051 I 0.000
ENSONIG00000015685 Oreochromis niloticus ENSONIG00000015685 I 0.000
TBX15 Oryctolagus cuniculus ENSOCUG00000012320 I 0.000
TBX22 Oryctolagus cuniculus ENSOCUG00000013685 I 0.000
TBX18 Oryctolagus cuniculus ENSOCUG00000002026 I 0.000
TBX15 Otolemur garnettii ENSOGAG00000007282 I 0.000
TBX18 Otolemur garnettii ENSOGAG00000004300 I 0.000
TBX22 Otolemur garnettii ENSOGAG00000002759 I 0.000
ENSOARG00000000455 Ovis aries ENSOARG00000000455 I 0.000
ENSOARG00000013317 Ovis aries ENSOARG00000013317 I 0.000
ENSOARG00000020376 Ovis aries ENSOARG00000020376 I 0.000
TBX18 Pan troglodytes ENSPTRG00000018390 I 0.000
TBX22 Pan troglodytes ENSPTRG00000022058 I 0.000
TBX15 Pan troglodytes ENSPTRG00000001172 I 0.000
ENSPANG00000004604 Papio anubis ENSPANG00000004604 I 0.000
ENSPANG00000025094 Papio anubis ENSPANG00000025094 I 0.000
ENSPSIG00000013362 Pelodiscus sinensis ENSPSIG00000013362 I 0.000
ENSPSIG00000017560 Pelodiscus sinensis ENSPSIG00000017560 I 0.000
ENSPSIG00000005286 Pelodiscus sinensis ENSPSIG00000005286 I 0.000
ENSPFOG00000018033 Poecilia formosa ENSPFOG00000018033 I 0.000
ENSPFOG00000003081 Poecilia formosa ENSPFOG00000003081 I 0.000
ENSPFOG00000000670 Poecilia formosa ENSPFOG00000000670 I 0.000
Pvit_12384 Pogona vitticeps Pvit_12384 I 0.000
Pvit_04496 Pogona vitticeps Pvit_04496 I 0.000
Pvit_09354 Pogona vitticeps Pvit_09354 I 0.000
ENSPPYG00000020504 Pongo abelii ENSPPYG00000020504 I 0.000
ENSPPYG00000000968 Pongo abelii ENSPPYG00000000968 I 0.000
ENSPPYG00000016815 Pongo abelii ENSPPYG00000016815 I 0.000
TBX15 Procavia capensis ENSPCAG00000016333 I 0.000
TBX22 Pteropus vampyrus ENSPVAG00000008832 I 0.000
TBX15 Pteropus vampyrus ENSPVAG00000015733 I 0.000
TBX18 Pteropus vampyrus ENSPVAG00000016771 I 0.000
Tbx22 Rattus norvegicus ENSRNOG00000002346 I 0.000
Tbx15 Rattus norvegicus ENSRNOG00000019565 I 0.000
Tbx18 Rattus norvegicus ENSRNOG00000010685 I 0.000
ENSSHAG00000012785 Sarcophilus harrisii ENSSHAG00000012785 I 0.000
ENSSHAG00000010820 Sarcophilus harrisii ENSSHAG00000010820 I 0.000
ENSSARG00000007424 Sorex araneus ENSSARG00000007424 I 0.000
TBX18 Sus scrofa ENSSSCG00000004290 I 0.000
TBX22 Sus scrofa ENSSSCG00000012449 I 0.000
TBX18 Taeniopygia guttata ENSTGUG00000012504 I 0.000
TBX22 Taeniopygia guttata ENSTGUG00000002573 I 0.000
TBX22 Takifugu rubripes ENSTRUG00000010801 I 0.000
tbx15 Takifugu rubripes ENSTRUG00000003945 I 0.000
tbx18 Takifugu rubripes ENSTRUG00000001419 I 0.000
ENSTSYG00000007267 Tarsius syrichta ENSTSYG00000007267 I 0.000
tbx18 Tetraodon nigroviridis ENSTNIG00000009690 I 0.000
tbx15 Tetraodon nigroviridis ENSTNIG00000015660 I 0.000
TBX22 Tupaia belangeri ENSTBEG00000010144 I 0.000
TBX18 Tupaia belangeri ENSTBEG00000007925 I 0.000
TBX18 Tursiops truncatus ENSTTRG00000005713 I 0.000
TBX15 Tursiops truncatus ENSTTRG00000011006 I 0.000
TBX22 Tursiops truncatus ENSTTRG00000014058 I 0.000
Tal_R000620 Tyto alba Tal_R000620 I 0.000
ENSVPAG00000010265 Vicugna pacos ENSVPAG00000010265 I 0.000
TBX18 Vicugna pacos ENSVPAG00000006869 I 0.000
TBX22 Vicugna pacos ENSVPAG00000011942 I 0.000
tbx15 Xenopus tropicalis XB-GENE-483924 I 0.000
tbx18 Xenopus tropicalis XB-GENE-489907 I 0.000
tbx22 Xenopus tropicalis XB-GENE-994522 I 0.000
ENSXMAG00000010831 Xiphophorus maculatus ENSXMAG00000010831 I 0.000
ENSXMAG00000015062 Xiphophorus maculatus ENSXMAG00000015062 I 0.000