BN946_scf184994.g56 (Trametes cinnabarina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 BN946_scf184994.g56 T326643_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY

RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.463 0.304
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW

AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.443 0.348
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD

HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.443 0.348
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CDO72803 Sox 18 88

Links

Other Sox family TFs
Other Trametes cinnabarina TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GG13746 Drosophila erecta FBgn0106009 N 0.000
Meics Drosophila melanogaster FBgn0025874 N 0.000
GM24571 Drosophila sechellia FBgn0179434 N 0.000
GE20043 Drosophila yakuba FBgn0237368 N 0.000