BRADI3G57700 (Brachypodium distachyon)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 BRADI3G57700 T326734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G57700.1 Sox 165 208

Links

Other Sox family TFs
Other Brachypodium distachyon TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OS02G0770600 Oryza sativa OS02G0770600 N 0.667
ORGLA02G0294700 Oryza glaberrima ORGLA02G0294700 N 0.667
OPUNC02G31450 Oryza punctata OPUNC02G31450 N 0.667
OMERI02G32400 Oryza meridionalis OMERI02G32400 I 0.667
Si017699m.g Setaria italica Si017699m.g N 0.667
BGIOSGA009119 Oryza indica BGIOSGA009119 N 0.667
Pavir.Aa00349 Panicum virgatum Pavir.Aa00349 N 0.667
Pavir.J01310 Panicum virgatum Pavir.J01310 N 0.667
OLONG_015646 Oryza longistaminata OLONG_015646 N 0.667
ONIVA02G36110 Oryza nivara ONIVA02G36110 I 0.667
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I 0.667
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I 0.667
OBART02G34050 Oryza barthii OBART02G34050 N 0.667
LPERR02G27910 Leersia perrieri LPERR02G27910 N 0.667
OB07G29110 Oryza brachyantha OB07G29110 N 0.667
OB02G40920 Oryza brachyantha OB02G40920 N 0.661
TRIUR3_20834 Triticum urartu TRIUR3_20834 N 0.657
MLOC_54605 Hordeum vulgare MLOC_54605 N 0.657
F775_20121 Aegilops tauschii F775_20121 N 0.657
Traes_6DL_647FC758E1 Triticum aestivum Traes_6DL_647FC758E1 N 0.657
POPTR_0003s01620 Populus trichocarpa POPTR_0003s01620 N 0.643
Gorai.005G260200 Gossypium raimondii Gorai.005G260200 N 0.642
SapurV1A.0647s0030 Salix purpurea SapurV1A.0647s0030 N 0.639
orange1.1g017878m.g Citrus sinensis orange1.1g017878m.g N 0.639
Ciclev10001601m.g Citrus clementina Ciclev10001601m.g N 0.639
MDP0000597087 Malus domestica MDP0000597087 N 0.623
mgf000387m Mimulus guttatus mgf000387m N 0.623
mgf013454m Mimulus guttatus mgf013454m N 0.623
POPTR_0001s21610 Populus trichocarpa POPTR_0001s21610 N 0.616
SapurV1A.0869s0080 Salix purpurea SapurV1A.0869s0080 N 0.616
TCM_006422 Theobroma cacao TCM_006422 N 0.616
30116.m000393 Ricinus communis 30116.m000393 N 0.613
Aquca_014_00165 Aquilegia coerulea Aquca_014_00165 N 0.611
orange1.1g020440m.g Citrus sinensis orange1.1g020440m.g N 0.609
Ciclev10001827m.g Citrus clementina Ciclev10001827m.g N 0.609
PGSC0003DMG400023744 Solanum tuberosum PGSC0003DMG400023744 N 0.605
VIT_12s0034g00960 Vitis vinifera VIT_12s0034g00960 N 0.585
gene11787-v1.0-hybrid Fragaria vesca gene11787-v1.0-hybrid N 0.583
PGSC0003DMG400026151 Solanum tuberosum PGSC0003DMG400026151 N 0.580
PRUPE_ppa007591mg Prunus persica PRUPE_ppa007591mg N 0.570
PK04394.1 Cannabis sativa PK04394.1 N 0.564
Cla002005 Citrullus lanatus Cla002005 N 0.564
Cucsa.239250 Cucumis sativus Cucsa.239250 N 0.564
GSMUA_Achr2G01240_001 Musa acuminata GSMUA_Achr2G01240_001 N 0.560
PK16821.1 Cannabis sativa PK16821.1 N 0.558
evm.TU.supercontig_49.134 Carica papaya evm.TU.supercontig_49.134 N 0.557
VIT_18s0001g03950 Vitis vinifera VIT_18s0001g03950 N 0.546
cassava19406.valid.m1 Manihot esculenta cassava19406.valid.m1 N 0.523
MDP0000634922 Malus domestica MDP0000634922 N 0.502
evm.TU.supercontig_49.133 Carica papaya evm.TU.supercontig_49.133 N 0.501
GSMUA_Achr8G18160_001 Musa acuminata GSMUA_Achr8G18160_001 N 0.468
Thhalv10028879m.g Eutrema salsugineum Thhalv10028879m.g N 0.454