CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CC1G_09089
(
Coprinopsis cinerea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CC1G_09089
T326943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAU83395
Sox
32
99
PKRQPSAYQLFCKEQMKKWNEENPGRAKEAMTQIAILWRDAPENPNRGQEPKARKPKAPKAAAKEKPA
Links
Other
Sox
family TFs
Other
Coprinopsis cinerea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M413DRAFT_168289
Hebeloma cylindrosporum
M413DRAFT_168289
N
0.550
GALMADRAFT_215335
Galerina marginata
GALMADRAFT_215335
I
0.545
PAXINDRAFT_100855
Paxillus involutus
PAXINDRAFT_100855
N
0.542
PAXRUDRAFT_625911
Paxillus rubicundulus
PAXRUDRAFT_625911
N
0.505
SCLCIDRAFT_1214155
Scleroderma citrinum
SCLCIDRAFT_1214155
N
0.503
LACBIDRAFT_297819
Laccaria bicolor
LACBIDRAFT_297819
N
0.494
K443DRAFT_674317
Laccaria amethystina
K443DRAFT_674317
N
0.494
EuGene.1100010174
Micromonas sp RCC299
EuGene.1100010174
N
0.484
estExt_fgenesh3_kg.C_170031
Heterobasidion annosum
estExt_fgenesh3_kg.C_170031
I
0.450
HETIRDRAFT_439796
Heterobasidion irregulare
HETIRDRAFT_439796
I
0.450
CY34DRAFT_417575
Suillus luteus
CY34DRAFT_417575
I
0.420