CGI_10017717 (Crassostrea gigas)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CGI_10017717 T327013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN

NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.425 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC17977 Sox 254 322

Links

Other Sox family TFs
Other Crassostrea gigas TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU02819 Neurospora crassa NCU02819 D 0.425
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.483
TC012723 Tribolium castaneum TC012723 I 0.734
L892_g13433 Steinernema scapterisci L892_g13433 I 0.480
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.700
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.415
AMEM006878 Anopheles merus AMEM006878 I 0.700
AMEC012857 Anopheles melas AMEC012857 I 0.700
AFAF011136 Anopheles farauti AFAF011136 I 0.700
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.710
ASIS016667 Anopheles sinensis ASIS016667 I 0.700
ACUA004409 Anopheles culicifacies ACUA004409 I 0.700
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.654
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.728
KGM_14572 Danaus plexippus KGM_14572 I 0.734
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.425
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.445
ISCW018867 Ixodes scapularis ISCW018867 I 0.700
LotgiG109021 Lottia gigantea LotgiG109021 I 0.730
HMEL005034 Heliconius melpomene HMEL005034 I 0.734
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.703
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.424
GB43084 Apis mellifera GB43084 I 0.726
MCINX005468 Melitaea cinxia MCINX005468 I 0.734
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.594
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.425
NV10488 Nasonia vitripennis NV10488 I 0.728
O9G_002262 Rozella allomycis O9G_002262 I 0.444
RPRC000650 Rhodnius prolixus RPRC000650 I 0.707
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.688
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.425
tox4b Danio rerio ENSDARG00000100163 I 0.660
BN7_5566 Wickerhamomyces ciferrii BN7_5566 I 0.425
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.463
CLEC001918 Cimex lectularius CLEC001918 I 0.707
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.707
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.703
ACEP19638 Atta cephalotes ACEP19638 I 0.634
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.622
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.513
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.734
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.445
AGAP000281 Anopheles gambiae AGAP000281 I 0.700
ADAC003252 Anopheles darlingi ADAC003252 I 0.700
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.478
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.441
AALB006415 Anopheles albimanus AALB006415 I 0.700
AATE016215 Anopheles atroparvus AATE016215 I 0.700
AARA010616 Anopheles arabiensis AARA010616 I 0.700
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.478
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.451
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.425
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.734
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.416
tox4.S Xenopus laevis XB-GENE-993810 I 0.660
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.703
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.421
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.525
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.707
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.484
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.468
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.484
AFUN005717 Anopheles funestus AFUN005717 N 0.525
AMAM014030 Anopheles maculatus AMAM014030 N 0.528
AMIN005634 Anopheles minimus AMIN005634 N 0.534
AEPI010254 Anopheles epiroticus AEPI010254 N 0.528
Minc06622 Meloidogyne incognita Minc06622 N 0.436
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.434
XP_002936155 Xenopus tropicalis XP_002936155 N 0.696
MDOA008605 Musca domestica MDOA008605 N 0.622
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.484
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.484
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.681
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.599
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.460
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.415
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.416
PTRK_0000294100 Parastrongyloides trichosuri PTRK_0000294100 N 0.440
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.638
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.484
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.671
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.484
SPAL_0001270100 Strongyloides papillosus SPAL_0001270100 N 0.440
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.416
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.681
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.474
TCLT_0000844001 Thelazia callipaeda TCLT_0000844001 N 0.541
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.484
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.416
SVE_0367300 Strongyloides venezuelensis SVE_0367300 N 0.440
SSTP_0001066100 Strongyloides stercoralis SSTP_0001066100 N 0.440
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.416
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N 0.465
nRc.2.0.1.g21669 Romanomermis culicivorax nRc.2.0.1.g21669 N 0.439
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.494
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.484
D918_09264 Trichuris suis D918_09264 N 0.681
D918_03887 Trichuris suis D918_03887 N 0.528
D917_05048 Trichinella nativa D917_05048 N 0.428
D917_02150 Trichinella nativa D917_02150 N 0.653
ASU_00726 Ascaris suum ASU_00726 N 0.468
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.484
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.656
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.650
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.484
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.638
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.627
NECAME_01599 Necator americanus NECAME_01599 N 0.484
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.656
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.656
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.436
L889_g13125 Steinernema feltiae L889_g13125 N 0.474
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.484
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.484
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.528
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.687
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.677
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.633
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.666
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.696
tox2 Oryzias latipes ENSORLG00000004818 N 0.687
tox4b Oryzias latipes ENSORLG00000008779 N 0.666
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.666
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.687
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.445
TOX2 Sorex araneus ENSSARG00000001080 N 0.494
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.687
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.687
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.500
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.666
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.687
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.650
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.644
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.503
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.656
ACYPI001480 Acyrthosiphon pisum ACYPI001480 N 0.422
Bm4188 Brugia malayi Bm4188 N 0.656
CBG11867 Caenorhabditis briggsae CBG11867 N 0.427
CBN07735 Caenorhabditis brenneri CBN07735 N 0.427
CBN31697 Caenorhabditis brenneri CBN31697 N 0.427
CJA03316 Caenorhabditis japonica CJA03316 N 0.427
CJA30740 Caenorhabditis japonica CJA30740 N 0.427
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.528
CRE14258 Caenorhabditis remanei CRE14258 N 0.427
EFV52201 Trichinella spiralis EFV52201 N 0.528
EFV56095 Trichinella spiralis EFV56095 N 0.428
EFV61455 Trichinella spiralis EFV61455 N 0.653
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.453
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.687
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.666
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.497
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.497
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.484
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.547
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.427
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.638
EDI_340970 Entamoeba dispar EDI_340970 N 0.438
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.689
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.500
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.494
Myotis_brandtii_DAP3_10031965 Myotis brandtii Myotis_brandtii_DAP3_10031965 N 0.449
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.696
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.696
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.715
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.537
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.716
PHUM393920 Pediculus humanus PHUM393920 N 0.478
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.418
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.687
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.687
CG12104 Drosophila melanogaster FBgn0035238 N 0.415
GA11397 Drosophila pseudoobscura FBgn0071451 N 0.426
GG14588 Drosophila erecta FBgn0106844 N 0.425
GL20738 Drosophila persimilis FBgn0158333 N 0.426
GM14202 Drosophila sechellia FBgn0169128 N 0.415
GD17612 Drosophila simulans FBgn0189162 N 0.415
GK17179 Drosophila willistoni FBgn0219178 N 0.429
GE20948 Drosophila yakuba FBgn0238234 N 0.415
HelroG145107 Helobdella robusta HelroG145107 N 0.655
ISCW015985 Ixodes scapularis ISCW015985 N 0.715
L798_00437 Zootermopsis nevadensis L798_00437 N 0.541
LOAG_18151 Loa loa LOAG_18151 N 0.656
MESCA003479 Megaselia scalaris MESCA003479 N 0.503
LCUP006200 Lucilia cuprina LCUP006200 N 0.632