CGI_10027770 (Crassostrea gigas)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CGI_10027770 T327025_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EKC28482 Sox 176 219

Links

Other Sox family TFs
Other Crassostrea gigas TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LotgiG105193 Lottia gigantea LotgiG105193 N 0.589
V565_033960 Rhizoctonia solani V565_033960 N 0.548
fgenesh2_pg.scaffold_5000103 Monosiga brevicollis fgenesh2_pg.scaffold_5000103 N 0.542
SOCG_00309 Schizosaccharomyces octosporus SOCG_00309 N 0.520
CapteG178344 Capitella teleta CapteG178344 N 0.517
ACYPI006465 Acyrthosiphon pisum ACYPI006465 N 0.513
CAOG_02676 Capsaspora owczarzaki CAOG_02676 N 0.509
Cflo_06149--XP_001122099.1_APIME Camponotus floridanus Cflo_06149--XP_001122099.1_APIME N 0.505
ACEP23223 Atta cephalotes ACEP23223 N 0.505
DAPPUDRAFT_306626 Daphnia pulex DAPPUDRAFT_306626 N 0.501
PTSG_02585 Salpingoeca rosetta PTSG_02585 N 0.497
TC012902 Tribolium castaneum TC012902 N 0.483
NV14872 Nasonia vitripennis NV14872 N 0.482
ENSPMAG00000002918 Petromyzon marinus ENSPMAG00000002918 N 0.480
LDEC009506 Leptinotarsa decemlineata LDEC009506 N 0.469
SPOG_02196 Schizosaccharomyces cryophilus SPOG_02196 N 0.455
SJAG_02223 Schizosaccharomyces japonicus SJAG_02223 N 0.453
EMIHUDRAFT_117867 Emiliania huxleyi EMIHUDRAFT_117867 I 0.450
OIDMADRAFT_54116 Oidiodendron maius OIDMADRAFT_54116 N 0.443
L892_g25427 Steinernema scapterisci L892_g25427 N 0.440
TriadG56122 Trichoplax adhaerens TriadG56122 N 0.431
CNG00580 Cryptococcus neoformans CNG00580 N 0.430
AMSG_09450 Thecamonas trahens AMSG_09450 N 0.428
fgenesh1_pm.9__12 Bigelowiella natans fgenesh1_pm.9__12 N 0.422
XP_002163918.1 Hydra magnipapillata XP_002163918.1 I 0.420