CH063_07887 (Colletotrichum higginsianum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CH063_07887 T327035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY

RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.644 0.667
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW

AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.498 0.362
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD

HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.498 0.362
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW

WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.488 0.362
ste11
M11343_2.00
Schizosaccharomyces pombe Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.488 0.362
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCF36281 Sox 150 218

Links

Other Sox family TFs
Other Colletotrichum higginsianum TFs

353 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_20810 Aegilops tauschii F775_20810 I 0.000
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.000
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I 0.000
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.000
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.000
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.000
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.000
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.000
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.000
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I 0.000
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.000
ERF13 Arabidopsis thaliana AT2G44840 D 0.000
ERF12 Arabidopsis thaliana AT1G28360 I 0.000
ERF3 Arabidopsis thaliana AT1G50640 D 0.000
ERF7 Arabidopsis thaliana AT3G20310 D 0.000
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.000
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.000
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.000
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.000
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.000
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.000
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.000
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.000
Bo3g066710 Brassica oleracea Bo3g066710 I 0.000
Bo5g109800 Brassica oleracea Bo5g109800 I 0.000
Bo6g022410 Brassica oleracea Bo6g022410 I 0.000
Bo1g102220 Brassica oleracea Bo1g102220 I 0.000
Bo1g108970 Brassica oleracea Bo1g108970 I 0.000
Bo7g048190 Brassica oleracea Bo7g048190 I 0.000
Bo3g074840 Brassica oleracea Bo3g074840 I 0.000
Bo3g143340 Brassica oleracea Bo3g143340 I 0.000
Bo4g024140 Brassica oleracea Bo4g024140 I 0.000
Bo4g195220 Brassica oleracea Bo4g195220 I 0.000
Bo5g055840 Brassica oleracea Bo5g055840 I 0.000
Bra032898 Brassica rapa Bra032898 I 0.000
Bra038261 Brassica rapa Bra038261 I 0.000
Bra001588 Brassica rapa Bra001588 I 0.000
Bra035792 Brassica rapa Bra035792 I 0.000
Bra037630 Brassica rapa Bra037630 I 0.000
Bra030094 Brassica rapa Bra030094 I 0.000
Bra039658 Brassica rapa Bra039658 I 0.000
Bra023748 Brassica rapa Bra023748 I 0.000
Bra018864 Brassica rapa Bra018864 I 0.000
Bra010881 Brassica rapa Bra010881 I 0.000
Bra004873 Brassica rapa Bra004873 I 0.000
Bra001784 Brassica rapa Bra001784 I 0.000
PK02998.1 Cannabis sativa PK02998.1 I 0.000
PK17878.1 Cannabis sativa PK17878.1 D 0.000
PK25211.1 Cannabis sativa PK25211.1 I 0.000
PK23186.1 Cannabis sativa PK23186.1 I 0.000
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.000
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.000
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.000
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.000
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.000
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.000
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.000
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.000
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.000
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.000
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.000
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.000
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.000
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.000
estExt_fgeneshCV_pg.C_120242 Chlorella vulgaris estExt_fgeneshCV_pg.C_120242 I 0.000
Ca_20544 Cicer arietinum Ca_20544 I 0.000
Ca_17824 Cicer arietinum Ca_17824 I 0.000
Ca_12205 Cicer arietinum Ca_12205 I 0.000
Ca_00326 Cicer arietinum Ca_00326 I 0.000
Ca_22534 Cicer arietinum Ca_22534 I 0.000
Cla005423 Citrullus lanatus Cla005423 I 0.000
Cla020002 Citrullus lanatus Cla020002 I 0.000
Cla013723 Citrullus lanatus Cla013723 I 0.000
Cla003319 Citrullus lanatus Cla003319 I 0.000
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.000
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.000
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.000
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.000
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.000
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.000
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.000
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.000
estExt_Genemark1.C_100079 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_100079 I 0.000
Cucsa.300100 Cucumis sativus Cucsa.300100 I 0.000
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.000
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.000
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.000
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.000
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.000
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.000
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.000
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.000
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.000
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.000
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.000
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.000
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.000
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.000
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.000
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.000
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.000
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.000
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.000
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.000
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.000
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.000
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.000
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.000
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.000
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.000
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.000
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.000
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.000
GLYMA15G08370 Glycine max GLYMA15G08370 I 0.000
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.000
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.000
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.000
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.000
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.000
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.000
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.000
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.000
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.000
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.000
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.000
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.000
Lus10017907.g Linum usitatissimum Lus10017907.g I 0.000
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.000
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.000
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.000
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.000
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.000
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.000
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.000
MDP0000629527 Malus domestica MDP0000629527 I 0.000
MDP0000744693 Malus domestica MDP0000744693 I 0.000
MDP0000236605 Malus domestica MDP0000236605 I 0.000
MDP0000243113 Malus domestica MDP0000243113 I 0.000
MDP0000310904 Malus domestica MDP0000310904 I 0.000
MDP0000542633 Malus domestica MDP0000542633 I 0.000
MDP0000457509 Malus domestica MDP0000457509 I 0.000
MDP0000839828 Malus domestica MDP0000839828 I 0.000
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.000
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.000
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.000
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.000
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.000
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.000
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.000
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.000
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.000
mgf023367m Mimulus guttatus mgf023367m I 0.000
mgf016282m Mimulus guttatus mgf016282m I 0.000
mgf007166m Mimulus guttatus mgf007166m I 0.000
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.000
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.000
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.000
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.000
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.000
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.000
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.000
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.000
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.000
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.000
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.000
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.000
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.000
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.000
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.000
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.000
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.000
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.000
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.000
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.000
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.000
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.000
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.000
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.000
fgenesh1_pg.scaffold_6000034 Physcomitrella patens fgenesh1_pg.scaffold_6000034 I 0.000
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.000
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.000
e_gw1.5.258.1 Physcomitrella patens e_gw1.5.258.1 I 0.000
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.000
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.000
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.000
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.000
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.000
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.000
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.000
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.000
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.000
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.000
Pm020210 Prunus mume Pm020210 I 0.000
Pm010083 Prunus mume Pm010083 I 0.000
Pm011907 Prunus mume Pm011907 I 0.000
Pm014953 Prunus mume Pm014953 I 0.000
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.000
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.000
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.000
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.000
27904.m000217 Ricinus communis 27904.m000217 I 0.000
29640.m000403 Ricinus communis 29640.m000403 I 0.000
30174.m008759 Ricinus communis 30174.m008759 I 0.000
30190.m011323 Ricinus communis 30190.m011323 I 0.000
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.000
SapurV1A.0007s0970 Salix purpurea SapurV1A.0007s0970 I 0.000
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.000
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.000
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.000
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.000
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.000
SELMODRAFT_73144 Selaginella moellendorffii SELMODRAFT_73144 I 0.000
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.000
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.000
SELMODRAFT_72880 Selaginella moellendorffii SELMODRAFT_72880 I 0.000
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I 0.000
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.000
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.000
SELMODRAFT_439762 Selaginella moellendorffii SELMODRAFT_439762 I 0.000
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.000
SELMODRAFT_402810 Selaginella moellendorffii SELMODRAFT_402810 I 0.000
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I 0.000
Si036615m.g Setaria italica Si036615m.g I 0.000
Si003053m.g Setaria italica Si003053m.g I 0.000
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.000
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.000
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.000
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.000
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.000
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.000
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.000
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.000
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.000
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.000
TCM_030804 Theobroma cacao TCM_030804 I 0.000
TCM_029823 Theobroma cacao TCM_029823 I 0.000
TCM_031608 Theobroma cacao TCM_031608 I 0.000
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.000
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.000
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.000
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.000
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.000
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.000
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.000
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.000
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.000
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.000
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.000