COCC4DRAFT_125132 (Bipolaris maydis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 COCC4DRAFT_125132 T327114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN

NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.419 0.377
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS

SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.419 0.377
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN

NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.419 0.377
ROX1
M11346_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.419 0.377
ROX1
M11347_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.419 0.377
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENI09744 Sox 131 199

Links

Other Sox family TFs
Other Bipolaris maydis TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
22516_YPR065W Saccharomyces mikatae 22516_YPR065W I 0.419
23192_YPR065W Saccharomyces paradoxus 23192_YPR065W I 0.419
AACERI_AaceriADL331C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL331C I 0.425
AB08896.1 Alternaria brassicicola AB08896.1 N 0.647
ACRE_020880 Acremonium chrysogenum ACRE_020880 N 0.454
AGOS_ADL331C Ashbya gossypii AGOS_ADL331C I 0.425
BN946_scf184829.g29 Trametes cinnabarina BN946_scf184829.g29 I 0.427
CBG12840 Caenorhabditis briggsae CBG12840 I 0.445
CC1G_03744 Coprinopsis cinerea CC1G_03744 I 0.453
CC1G_07858 Coprinopsis cinerea CC1G_07858 N 0.465
COCMIDRAFT_88977 Bipolaris oryzae COCMIDRAFT_88977 I 0.741
COCSADRAFT_159051 Bipolaris sorokiniana COCSADRAFT_159051 I 0.741
COCVIDRAFT_33898 Bipolaris victoriae COCVIDRAFT_33898 N 0.659
DICSQDRAFT_67430 Dichomitus squalens DICSQDRAFT_67430 I 0.426
DILT_0001026601 Diphyllobothrium latum DILT_0001026601 I 0.430
Ecym_3473 Eremothecium cymbalariae Ecym_3473 I 0.425
estExt_fgeneshPB_pg.C_100218 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_100218 N 0.429
EV44_g3421 Erysiphe necator EV44_g3421 I 0.426
fgenesh1_pg.C_scaffold_14000043 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000043 I 0.439
fgeneshMC_pg.2_#_1032 Mucor circinelloides fgeneshMC_pg.2_#_1032 N 0.435
fgeneshMC_pg.3_#_381 Mucor circinelloides fgeneshMC_pg.3_#_381 N 0.435
fgeneshMC_pg.7_#_500 Mucor circinelloides fgeneshMC_pg.7_#_500 I 0.419
fgeneshMC_pg.8_#_228 Mucor circinelloides fgeneshMC_pg.8_#_228 I 0.438
fgeneshPB_pg.1__316 Phycomyces blakesleeanus fgeneshPB_pg.1__316 N 0.433
fgeneshPB_pg.4__59 Phycomyces blakesleeanus fgeneshPB_pg.4__59 I 0.417
FGRRES_08890 Fusarium graminearum FGRRES_08890 N 0.416
FPSE_08224 Fusarium pseudograminearum FPSE_08224 N 0.416
GLOINDRAFT_26890 Rhizophagus irregularis GLOINDRAFT_26890 N 0.427
GLOINDRAFT_29935 Rhizophagus irregularis GLOINDRAFT_29935 N 0.531
GLOINDRAFT_46580 Rhizophagus irregularis GLOINDRAFT_46580 I 0.481
GLOINDRAFT_47877 Rhizophagus irregularis GLOINDRAFT_47877 N 0.426
GSTUM_00001090001 Tuber melanosporum GSTUM_00001090001 I 0.417
J056_002766 Wallemia ichthyophaga J056_002766 N 0.420
KAFR_0G02830 Kazachstania africana KAFR_0G02830 I 0.435
L798_09327 Zootermopsis nevadensis L798_09327 I 0.430
LEMA_P114390.1 Leptosphaeria maculans LEMA_P114390.1 I 0.645
M407DRAFT_219396 Tulasnella calospora M407DRAFT_219396 N 0.429
M422DRAFT_110441 Sphaerobolus stellatus M422DRAFT_110441 N 0.429
M422DRAFT_121750 Sphaerobolus stellatus M422DRAFT_121750 N 0.443
M422DRAFT_126587 Sphaerobolus stellatus M422DRAFT_126587 N 0.443
M422DRAFT_89750 Sphaerobolus stellatus M422DRAFT_89750 I 0.438
Moror_2734 Moniliophthora roreri Moror_2734 I 0.421
Moror_4096 Moniliophthora roreri Moror_4096 I 0.418
NCAS_0A11120 Naumovozyma castellii NCAS_0A11120 I 0.423
PAXINDRAFT_17515 Paxillus involutus PAXINDRAFT_17515 I 0.455
PAXRUDRAFT_47613 Paxillus rubicundulus PAXRUDRAFT_47613 I 0.455
PTRG_07337 Pyrenophora triticirepentis PTRG_07337 N 0.647
PTT_09966 Pyrenophora teres PTT_09966 N 0.612
RHTO_01537 Rhodosporidium toruloides RHTO_01537 N 0.462
RO3G_03011 Rhizopus oryzae RO3G_03011 N 0.435
RO3G_10625 Rhizopus oryzae RO3G_10625 N 0.435
S40285_04294 Stachybotrys chlorohalonata S40285_04294 N 0.455
SAKL0B07656g Lachancea kluyveri SAKL0B07656g I 0.426
Scas_Contig667.28 Saccharomyces castellii Scas_Contig667.28 I 0.423
SCHCODRAFT_111683 Schizophyllum commune SCHCODRAFT_111683 N 0.481
SCHCODRAFT_230584 Schizophyllum commune SCHCODRAFT_230584 I 0.454
SMAR001063 Strigamia maritima SMAR001063 I 0.441
SMU15015648 Schmidtea mediterranea SMU15015648 I 0.430
SPPG_07085 Spizellomyces punctatus SPPG_07085 I 0.416
SSLN_0000478001 Schistocephalus solidus SSLN_0000478001 I 0.430
SU7_3656 Saccharomyces arboricola SU7_3656 I 0.419
TC007345 Tribolium castaneum TC007345 I 0.420
XP_002160058.1 Hydra magnipapillata XP_002160058.1 I 0.422
ROX1 Saccharomyces cerevisiae YPR065W D 0.419
ZBAI_00827 Zygosaccharomyces bailii ZBAI_00827 I 0.420
ZBAI_06138 Zygosaccharomyces bailii ZBAI_06138 I 0.420
ZYRO0D15312g Zygosaccharomyces rouxii ZYRO0D15312g I 0.427