CPIJ014424 (Culex quinquefasciatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CPIJ014424 T327204_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sox14
M03971_2.00
Drosophila melanogaster
BTGTWCGGTR

YACCGWACAV
SELEX
Nitta et al.(2015)
Sox14_1
0.452 0.780
Sox14
M03972_2.00
Drosophila melanogaster
VACAATDNCATTGTB

VACAATGNHATTGTB
SELEX
Nitta et al.(2015)
Sox14_2
0.452 0.780
Sox14
M06449_2.00
Drosophila melanogaster
VYYCTTTGTYC

GRACAAAGRRB
B1H
Zhu et al.(2011)
Sox14_SANGER_10_FBgn0005612
0.452 0.780
SOX4
M01026_2.00
Homo sapiens
AACAAWGR

YCWTTGTT
PBM
Scharer et al.(2009)
Sox4
0.426 0.805
Sox4
M00213_2.00
Mus musculus
NNVACAAWD

HWTTGTBNN
PBM
Badis et al.(2009)
Sox4_2941
0.426 0.805
SOX4
M03496_2.00
Homo sapiens
NAACAATTKCAGTGTT

AACACTGMAATTGTTN
SELEX
Jolma et al.(2013)
SOX4_1
0.426 0.805
SOX4
M05765_2.00
Homo sapiens
NRACAAWGVV

BBCWTTGTYN
SELEX
Yin et al.(2017)
SOX4_eDBD_HT-SELEX
0.426 0.805
SOX4
M09388_2.00
Homo sapiens
BYCTTTGTYYBB

VVRRACAAAGRV
Misc
Kulakovskiy et al.(2013)
SOX4_HUMAN.H11MO.0.B
0.426 0.805
Sox4
M09410_2.00
Mus musculus
BYCTTTGTYYBB

VVRRACAAAGRV
Misc
Kulakovskiy et al.(2013)
SOX4_MOUSE.H11MO.0.A
0.426 0.805
Sox4
M09641_2.00
Mus musculus
BCWTTGTYCN

NGRACAAWGV
Misc
Heinz et al.(2010)
proB-Sox4_GSE50066
0.426 0.805
SOX4
M11301_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX4_Q3
0.426 0.805
SOX4
M11302_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX4_Q5_02
0.426 0.805
SOX4
M11303_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX4_Q5
0.426 0.805
SOX4
M05766_2.00
Homo sapiens
NRACAAWGVV

BBCWTTGTYN
SELEX
Yin et al.(2017)
SOX4_eDBD_Methyl-HT-SELEX
0.426 0.805
Sox11
M00210_2.00
Mus musculus
WTTGTBNNN

NNNVACAAW
PBM
Badis et al.(2009)
Sox11_2266
0.426 0.780
Sox11
M03541_2.00
Mus musculus
AACAATTKCAGTGTT

AACACTGMAATTGTT
SELEX
Jolma et al.(2013)
Sox11_1
0.426 0.780
SOX11
M11326_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX11_Q6
0.426 0.780
sem-2
M02488_2.00
Caenorhabditis elegans
NNNHVNNNNN

NNNNNBDNNN
PBM
Weirauch et al.(2014)
pTH9043
0.420 0.780
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ014424-PA Sox 85 125

Links

Other Sox family TFs
Other Culex quinquefasciatus TFs

423 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.J11397 Panicum virgatum Pavir.J11397 N 0.000
Sb03g002050 Sorghum bicolor Sb03g002050 N 0.000
BZIP06 Oryza sativa OS01G0756200 N 0.000
BZIP02 Oryza sativa OS01G0211800 N 0.000
ORUFI02G10470 Oryza rufipogon ORUFI02G10470 N 0.000
ORUFI01G34500 Oryza rufipogon ORUFI01G34500 N 0.000
ORUFI01G07680 Oryza rufipogon ORUFI01G07680 N 0.000
ORGLA02G0094900 Oryza glaberrima ORGLA02G0094900 N 0.000
ORGLA01G0254900 Oryza glaberrima ORGLA01G0254900 N 0.000
OPUNC02G09400 Oryza punctata OPUNC02G09400 N 0.000
OPUNC01G30390 Oryza punctata OPUNC01G30390 N 0.000
OPUNC01G06850 Oryza punctata OPUNC01G06850 N 0.000
ONIVA02G11660 Oryza nivara ONIVA02G11660 N 0.000
Sb03g034950 Sorghum bicolor Sb03g034950 N 0.000
Sb04g008840 Sorghum bicolor Sb04g008840 N 0.000
Si002311m.g Setaria italica Si002311m.g N 0.000
Pavir.J05339 Panicum virgatum Pavir.J05339 N 0.000
Pavir.Eb03400 Panicum virgatum Pavir.Eb03400 N 0.000
Pavir.Ea02752 Panicum virgatum Pavir.Ea02752 N 0.000
Pavir.Ab01112 Panicum virgatum Pavir.Ab01112 N 0.000
Pavir.Aa02794 Panicum virgatum Pavir.Aa02794 N 0.000
TRIUR3_19907 Triticum urartu TRIUR3_19907 N 0.000
Traes_5DL_D30ADBFDE Triticum aestivum Traes_5DL_D30ADBFDE N 0.000
Traes_5BL_573ABF1D7 Triticum aestivum Traes_5BL_573ABF1D7 N 0.000
TRAES3BF093300030CFD_g Triticum aestivum TRAES3BF093300030CFD_g N 0.000
Traes_2BS_C9A338257 Triticum aestivum Traes_2BS_C9A338257 N 0.000
Si018161m.g Setaria italica Si018161m.g N 0.000
Si002546m.g Setaria italica Si002546m.g N 0.000
ONIVA01G35770 Oryza nivara ONIVA01G35770 N 0.000
ONIVA01G09160 Oryza nivara ONIVA01G09160 N 0.000
LPERR01G06720 Leersia perrieri LPERR01G06720 N 0.000
GSMUA_Achr9G06540_001 Musa acuminata GSMUA_Achr9G06540_001 N 0.000
GSMUA_Achr6G26930_001 Musa acuminata GSMUA_Achr6G26930_001 N 0.000
GRMZM2G170079 Zea mays GRMZM2G170079 N 0.000
GRMZM2G158313 Zea mays GRMZM2G158313 N 0.000
GRMZM2G027976 Zea mays GRMZM2G027976 N 0.000
F775_31528 Aegilops tauschii F775_31528 N 0.000
BRADI3G09340 Brachypodium distachyon BRADI3G09340 N 0.000
BRADI2G50220 Brachypodium distachyon BRADI2G50220 N 0.000
BRADI2G06790 Brachypodium distachyon BRADI2G06790 N 0.000
BGIOSGA007886 Oryza indica BGIOSGA007886 N 0.000
BGIOSGA004481 Oryza indica BGIOSGA004481 N 0.000
LPERR01G26930 Leersia perrieri LPERR01G26930 N 0.000
MLOC_39203 Hordeum vulgare MLOC_39203 N 0.000
MLOC_66252 Hordeum vulgare MLOC_66252 N 0.000
OMERI02G11410 Oryza meridionalis OMERI02G11410 N 0.000
OMERI01G28450 Oryza meridionalis OMERI01G28450 N 0.000
OLONG_014610 Oryza longistaminata OLONG_014610 N 0.000
OLONG_003093 Oryza longistaminata OLONG_003093 N 0.000
OGLUM02G10470 Oryza glumaepatula OGLUM02G10470 N 0.000
OGLUM01G08020 Oryza glumaepatula OGLUM01G08020 N 0.000
OBART02G10550 Oryza barthii OBART02G10550 N 0.000
OBART01G31310 Oryza barthii OBART01G31310 N 0.000
OBART01G07120 Oryza barthii OBART01G07120 N 0.000
OB01G40300 Oryza brachyantha OB01G40300 N 0.000
OB01G17130 Oryza brachyantha OB01G17130 N 0.000
MLOC_72368 Hordeum vulgare MLOC_72368 N 0.000
AC233853.1_FG002 Zea mays AC233853.1_FG002 N 0.000