CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CY34DRAFT_417575
(
Suillus luteus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CY34DRAFT_417575
T327283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
INO
M02485_2.00
Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN
PBM
Weirauch et al.(2014)
pTH7516
0.459
0.375
CRC
M07266_2.00
Arabidopsis thaliana
TWATCATW
WATGATWA
Dap-seq
OMalley et al.(2016)
CRC_col_a
0.443
0.354
CRC
M07267_2.00
Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC
Dap-seq
OMalley et al.(2016)
CRC_colamp_a
0.443
0.354
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK37942
Sox
30
77
PKRAPSAYNLFVQAHMKEWKEAHPGAPIKEAMSEIAVMWREAPENPNR
Links
Other
Sox
family TFs
Other
Suillus luteus
TFs
172 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy