CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_323625
(
Daphnia pulex
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
DAPPUDRAFT_323625
T327336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX75188
Sox
35
71
ASIAETWKALSKEEQQPFYDVTAMTNALLDEEKKAID
EFX75188
Sox
153
187
VAESHSDWPTLSPAQQRHFIHQAKVEYHNYNHRSS
Links
Other
Sox
family TFs
Other
Daphnia pulex
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g18776
Steinernema feltiae
L889_g18776
N
0.473
VDBG_09577
Verticillium albo atrum
VDBG_09577
N
0.462
VDBG_09577
Verticillium alfalfae
VDBG_09577
N
0.462
GLOINDRAFT_33320
Rhizophagus irregularis
GLOINDRAFT_33320
N
0.457
GPUH_0001439101
Gongylonema pulchrum
GPUH_0001439101
N
0.449